RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 DOLPP1Q86YN1 238 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 SMIM4Q8WVI0 70 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 NMES1Q9C002 83 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 ARV1Q9H2C2 271 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 INTS1Q8N201 2190 aaKnown RBP6.87□□□□□ -1.31
CTNND1-230ENST00000532245 SMLR1H3BR10 107 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 SULT1A3P0DMM9 295 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 SULT1A4P0DMN0 295 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 BLOC1S1P78537 153 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 CCDC144NLQ6NUI1 221 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 ARRDC1Q8N5I2 433 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 IFNL4K9M1U5 179 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 OR10J4P0C629 311 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 CSN1S1P47710 185 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 ARPC5LQ9BPX5 153 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 RNF122Q9H9V4 155 aa6.87□□□□□ -1.31
CTNND1-230ENST00000532245 MDC1Q14676 2089 aaKnown RBP6.87□□□□□ -1.31
CTNND1-230ENST00000532245 RTTNQ86VV8 2226 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 TSPAN9O75954 239 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 KIR2DS2P43631 304 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 FAM74A1Q5RGS3 127 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 Q6ZS92 163 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ZNF596Q8TC21 504 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 BCL2L2Q92843 193 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ZNF436Q9C0F3 470 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ASCL3Q9NQ33 180 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ANKRD36A6QL64 1941 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 RPS10-NUDT3A0A1W2PQS6 291 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 SH2D7A6NKC9 451 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 K7EQM0 130 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 MGST3O14880 152 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 NDUFA2O43678 99 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 LMX1BO60663 402 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 SS18L1O75177 396 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 OR2H2O95918 312 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ACKR3P25106 362 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 RPS27AP62979 156 aaKnown RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 TMEM267Q0VDI3 215 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 TEX30Q5JUR7 227 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 C10orf128Q5T292 105 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ST6GALNAC3Q8NDV1 305 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 OR52B4Q8NGK2 314 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 OR4S2Q8NH73 311 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 OR2T6Q8NHC8 308 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 ADGRG7Q96K78 797 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 PARP12Q9H0J9 701 aaKnown RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 SEMA5BQ9P283 1151 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 IL19Q9UHD0 177 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 A0A0D9SG52 128 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 POM121CA8CG34 1229 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 SEMA7AO75326 666 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 THY1P04216 161 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 IL5P05113 134 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 COX5BP10606 129 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 TMEM104Q8NE00 496 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 OR5AP2Q8NGF4 316 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 FLYWCH2Q96CP2 140 aaKnown RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 PRDM14Q9GZV8 571 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 THYN1Q9P016 225 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 IGKV1D-43A0A0B4J1Z2 117 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 TMEM127O75204 238 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 FOXH1O75593 365 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 APOC3P02656 99 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 RBM11P57052 281 aaKnown RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 LINC00303Q3SY05 128 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 FAM201AQ5SY85 155 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 C1orf162Q8NEQ5 155 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 HDHD3Q9BSH5 251 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 SEBOXQ9HB31 216 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 NOTCH4Q99466 2003 aa6.86□□□□□ -1.31
CTNND1-230ENST00000532245 SPTAN1Q13813 2472 aaKnown RBP6.86□□□□□ -1.31
CTNND1-230ENST00000532245 C3orf85A0A1B0GTC6 90 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 J3QKU1 62 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 LALBAP00709 142 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 THBS3P49746 956 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 MMP15P51511 669 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 ADTRPQ96IZ2 230 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 HARBI1Q96MB7 349 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 FAM212BQ9NTI7 297 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-230ENST00000532245 OR7C2O60412 319 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 GALP22466 123 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 S100A1P23297 94 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 BMI1P35226 326 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 BPIFB3P59826 476 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 FAM3AP98173 230 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 LYG2Q86SG7 212 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 ZCCHC24Q8N2G6 241 aaKnown RBP6.85□□□□□ -1.31
CTNND1-230ENST00000532245 OR2G3Q8NGZ4 309 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 NEIL1Q96FI4 390 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-230ENST00000532245 NPAS1Q99742 590 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 TMEM106BQ9NUM4 274 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 CDRT15L2A8MXV6 281 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
CTNND1-230ENST00000532245 FGF2P09038 288 aa6.85□□□□□ -1.31
CTNND1-230ENST00000532245 MGST1P10620 155 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms