RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 NOS1APO75052 506 aaPredicted RBP13.89□□□□□ -0.19
PKP3-208ENST00000531857 GATBO75879 557 aaKnown RBP13.89□□□□□ -0.19
PKP3-208ENST00000531857 NXPH2O95156 264 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 NRASP01111 189 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 MTNR1BP49286 362 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 DEFB121Q5J5C9 76 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 MZT2AQ6P582 158 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 FAM220AQ7Z4H9 259 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 OR13D1Q8NGV5 346 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 HES4Q9HCC6 221 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 HILPDAQ9Y5L2 63 aa13.89□□□□□ -0.19
PKP3-208ENST00000531857 A0A1W2PQL4 384 aaPredicted RBP13.88□□□□□ -0.19
PKP3-208ENST00000531857 ACOD1A6NK06 481 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 K7N7A8 449 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 ARL6IP5O75915 188 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 APOL3O95236 402 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 ZNF728P0DKX0 622 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 IGHV1-8P0DP01 117 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 PF4V1P10720 104 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 PTBP1P26599 531 aaKnown RBP eCLIP13.88□□□□□ -0.19
PKP3-208ENST00000531857 DYNLT3P51808 116 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 ZNF85Q03923 595 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 ZNF684Q5T5D7 378 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 KCTD12Q96CX2 325 aaKnown RBP13.88□□□□□ -0.19
PKP3-208ENST00000531857 TTTY10Q9BZA0 68 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 GPR173Q9NS66 373 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 ADAM30Q9UKF2 790 aa13.88□□□□□ -0.19
PKP3-208ENST00000531857 PQLC2LA1A4F0 135 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 J3QLW9 94 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 F2RL2O00254 374 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 ZNF19P17023 458 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 OR12D2P58182 307 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 COL10A1Q03692 680 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 MFGE8Q08431 387 aaPredicted RBP13.87□□□□□ -0.19
PKP3-208ENST00000531857 DMKNQ6E0U4 476 aaPredicted RBP13.87□□□□□ -0.19
PKP3-208ENST00000531857 TCF23Q7RTU1 214 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 ZNF573Q86YE8 665 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 C4orf36Q96KX1 117 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 C6orf62Q9GZU0 229 aaPredicted RBP13.87□□□□□ -0.19
PKP3-208ENST00000531857 SLC22A13Q9Y226 551 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 POLDIP2Q9Y2S7 368 aa13.87□□□□□ -0.19
PKP3-208ENST00000531857 A6NIN4 97 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 GABRPO00591 440 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 ZNF737O75373 536 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 DHRS3O75911 302 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 CDRT1O95170 752 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 RBP4P02753 201 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 TTRP02766 147 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 KRT8P05787 483 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 MRPL3P09001 348 aaKnown RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 MYL9P24844 172 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 RPS19P39019 145 aaKnown RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 EDDM3BP56851 147 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 ERVK11-1P61568 191 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 RPS25P62851 125 aaKnown RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 TMEM42Q69YG0 159 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 C22orf42Q6IC83 251 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 KCTD18Q6PI47 426 aaPredicted RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 DEGS2Q6QHC5 323 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 ANGPTL5Q86XS5 388 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 ASCC1Q8N9N2 400 aaKnown RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 SMIM19Q96E16 107 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 CCDC32Q9BV29 185 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 MROQ9BYG7 248 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 RABL2AQ9UBK7 228 aaPredicted RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 NUFIP1Q9UHK0 495 aaKnown RBP13.86□□□□□ -0.19
PKP3-208ENST00000531857 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 RABL2BQ9UNT1 228 aa13.86□□□□□ -0.19
PKP3-208ENST00000531857 TRAV1-2A0A0B4J238 106 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 TCRBV4S1A1TA0A5B7 111 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 FAM90A22PA8MWA6 464 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 F8VVB4 439 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 F8VWA3 439 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 PF4P02776 101 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 ALDOBP05062 364 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 MPZP25189 248 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 MAPK3P27361 379 aaPredicted RBP13.85□□□□□ -0.19
PKP3-208ENST00000531857 FABP5Q01469 135 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 RGS21Q2M5E4 152 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 CLVS2Q5SYC1 327 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 DDI2Q5TDH0 399 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 C10orf99Q6UWK7 81 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 CENPVQ7Z7K6 275 aaPredicted RBP13.85□□□□□ -0.19
PKP3-208ENST00000531857 MFSD4AQ8N468 514 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 KIAA2026Q5HYC2 2103 aa13.85□□□□□ -0.19
PKP3-208ENST00000531857 SRSF10O75494 262 aaKnown RBP13.84□□□□□ -0.19
PKP3-208ENST00000531857 CD24P25063 80 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 HOXD3P31249 432 aaPredicted RBP13.84□□□□□ -0.19
PKP3-208ENST00000531857 SDC2P34741 201 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 RANBP1P43487 201 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 PPP3R1P63098 170 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 ROM1Q03395 351 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 CDK5R1Q15078 307 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 YIF1BQ5BJH7 314 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 GDPD3Q7L5L3 318 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 ZNF679Q8IYX0 411 aa13.84□□□□□ -0.19
PKP3-208ENST00000531857 PPP1R14BQ96C90 147 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms