RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DEGS1O15121 323 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 OR7C1O76099 320 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 CDS2O95674 445 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 CFDP00746 253 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 CRYABP02511 175 aaKnown RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 GAPDHP04406 335 aaKnown RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 NMBP08949 121 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 TPT1P13693 172 aaKnown RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 M6PRP20645 277 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 WNT5AP41221 380 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 HAAOP46952 286 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 KCNJ3P48549 501 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 GPM6AP51674 278 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 SLURP1P55000 103 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 IL15RAQ13261 267 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 ZNF169Q14929 603 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 PIGYQ3MUY2 71 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 PAN3Q58A45 887 aaKnown RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 FAM76BQ5HYJ3 339 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 RGS7BPQ6MZT1 257 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 SLC22A25Q6T423 547 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 UQCC3Q6UW78 93 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 MDP1Q86V88 176 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 CALHM1Q8IU99 346 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 LGI3Q8N145 548 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 FAM58AQ8N1B3 248 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 STPG2Q8N412 459 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 POC1AQ8NBT0 407 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 FDCSPQ8NFU4 85 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 OR4A4PQ8NGN8 299 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 LILRB1Q8NHL6 650 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 RTN4IP1Q8WWV3 396 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 EXTL1Q92935 676 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 RBPMSQ93062 196 aaKnown RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 IL22RA2Q969J5 263 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 SPIN2AQ99865 258 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 SPIN2BQ9BPZ2 258 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 BCL2L14Q9BZR8 327 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 NAA60Q9H7X0 242 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 SEBOXQ9HB31 216 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 Q9N2K0 584 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 PLSCR4Q9NRQ2 329 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 RASL12Q9NYN1 266 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 RDH8Q9NYR8 311 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 MBD2Q9UBB5 411 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 GLS2Q9UI32 602 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 PRSS50Q9UI38 385 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 ZNF230Q9UIE0 474 aaPredicted RBP4.75□□□□□ -1.65
PCF11-205ENST00000530906 PCDHB10Q9UN67 800 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 AMDHD2Q9Y303 409 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 TMED3Q9Y3Q3 217 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 ATP23Q9Y6H3 246 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 DNAJC13O75165 2243 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 C13orf42A0A1B0GVH6 325 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 MBD3L4A6NDZ8 208 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 MBD3L3A6NE82 208 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 MFSD2BA6NFX1 497 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 MBD3L5A6NJ08 208 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 A8MXK9 166 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 TRDCB7Z8K6 153 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 EEF1E1-BLOC1S5C9J1V9 151 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 E5RGE8 158 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 F5H0A9 414 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 SDCBPO00560 298 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 CCSO14618 274 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 NKX2-8O15522 239 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 SMPD2O60906 423 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 WDR1O75083 606 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 TUSC2O75896 110 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PLATP00750 562 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 KNG1P01042 644 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PPYP01298 95 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 IGKV3-15P01624 115 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 BCL3P20749 454 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 ZP3P21754 424 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 CCNOP22674 350 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 GLRA1P23415 457 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 IL32P24001 234 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 FCGR2CP31995 323 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 CCL11P51671 97 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PIGPP57054 158 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PPP1CBP62140 327 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 SNTB1Q13884 538 aaKnown RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 SLC9A3R2Q15599 337 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 MSMO1Q15800 293 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 AANATQ16613 207 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 IAH1Q2TAA2 248 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 ACSF3Q4G176 576 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 HIKESHIQ53FT3 197 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 TOR2AQ5JU69 321 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 GPR157Q5UAW9 335 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 ZNF880Q6PDB4 577 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 BAP18Q8IXM2 172 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 CMTM1Q8IZ96 169 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 GAPTQ8N292 157 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 FAM71E2Q8N5Q1 922 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 MBD3L2Q8NHZ7 208 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 DCUN1D4Q92564 292 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms