RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 FBXW12Q6X9E4 464 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 C6orf120Q7Z4R8 191 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 LHFPL4Q7Z7J7 247 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 OR5AS1Q8N127 324 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 CADM2Q8N3J6 435 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 COMMD1Q8N668 190 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 NATD1Q8N6N6 113 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 OR4Q3Q8NH05 313 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 THRSPQ92748 146 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 ROPN1LQ96C74 230 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 MALSU1Q96EH3 234 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 SLC25A44Q96H78 314 aaPredicted RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 AKR1E2Q96JD6 320 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 LINC00479Q96M42 142 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 CCDC115Q96NT0 180 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 MYCBPQ99417 103 aaPredicted RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 CABLES2Q9BTV7 478 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 OCR1Q9BZK8 76 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 OR2H1Q9GZK4 316 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 C12orf10Q9HB07 376 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 MRPL39Q9NYK5 338 aaKnown RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 STK38LQ9Y2H1 464 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 TIMM22Q9Y584 194 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 TRAV36DV7A0A075B6V5 113 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 FBLL1A6NHQ2 334 aaKnown RBP5.04□□□□□ -1.6
SVIP-204ENST00000530199 IQCF6A8MYZ5 107 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 EPM2AB3EWF7 344 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 CCRL2O00421 344 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 LSM1O15116 133 aaKnown RBP5.04□□□□□ -1.6
SVIP-204ENST00000530199 FCGR3AP08637 254 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 SNRPAP09012 282 aaKnown RBP5.04□□□□□ -1.6
SVIP-204ENST00000530199 DUX4L4P0CJ87 422 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 PGA4P0DJD7 388 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 PGA3P0DJD8 388 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 PGA5P0DJD9 388 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 COX5BP10606 129 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 ETS2P15036 469 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 SDC1P18827 310 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 PKNOX1P55347 436 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 C2orf54Q08AI8 447 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 MPPED2Q15777 294 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 ANKRD55Q3KP44 614 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 ZNF836Q6ZNA1 936 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 SLC36A1Q7Z2H8 476 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 HMGN2P46Q86SG4 172 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 SGPP2Q8IWX5 399 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 C10orf111Q8N326 155 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 CLDN22Q8N7P3 220 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 OR5AK3PQ8NH89 298 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 KCNA7Q96RP8 456 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 DPY30Q9C005 99 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 MDFICQ9P1T7 246 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 GHRLQ9UBU3 117 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 SPATA2Q9UM82 520 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 B9D1Q9UPM9 204 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 STARD10Q9Y365 291 aa5.04□□□□□ -1.6
SVIP-204ENST00000530199 TBL2Q9Y4P3 447 aaKnown RBP5.04□□□□□ -1.6
SVIP-204ENST00000530199 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 TCRBV9S1A1TA0A576 114 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 A8MT66 165 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 CENPBD1B2RD01 187 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 PLPP3O14495 311 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 SDHDO14521 159 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 NDUFB3O43676 98 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 RHBDL1O75783 438 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 C6orf47O95873 294 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 GKN3PP0CG01 181 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 MUC1P15941 1255 aaPredicted RBP5.03□□□□□ -1.6
SVIP-204ENST00000530199 HTR2AP28223 471 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 CAPGP40121 348 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 OR3A4PP47883 348 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 TGM4P49221 684 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 SLC7A2P52569 658 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 BNIP1Q12981 228 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 ABCA11PQ4W5N1 156 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 BEND6Q5SZJ8 279 aaPredicted RBP5.03□□□□□ -1.6
SVIP-204ENST00000530199 C10orf128Q5T292 105 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 FAM27BQ5VT28 67 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 PRAMEF6Q5VXH4 476 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 OR2T2Q6IF00 324 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 SLC35G5Q96KT7 338 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 TEX37Q96LM6 180 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 CCDC28BQ9BUN5 200 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 SLC38A1Q9H2H9 487 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 OR51I1Q9H343 314 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 HEXA-AS1Q9H8Q6 139 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 ELL3Q9HB65 397 aaPredicted RBP5.03□□□□□ -1.6
SVIP-204ENST00000530199 RETNQ9HD89 108 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 ISYNA1Q9NPH2 558 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 RRAGDQ9NQL2 400 aaPredicted RBP5.03□□□□□ -1.6
SVIP-204ENST00000530199 UFSP2Q9NUQ7 469 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 TMEM100Q9NV29 134 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 GUCA1BQ9UMX6 200 aa5.03□□□□□ -1.6
SVIP-204ENST00000530199 IGKV1D-42A0A075B6H8 117 aa5.02□□□□□ -1.61
SVIP-204ENST00000530199 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
SVIP-204ENST00000530199 SUPT7LO94864 414 aa5.02□□□□□ -1.61
SVIP-204ENST00000530199 HLA-DPB1P04440 258 aa5.02□□□□□ -1.61
SVIP-204ENST00000530199 DBIP07108 87 aaKnown RBP5.02□□□□□ -1.61
SVIP-204ENST00000530199 GSTT2P0CG29 244 aa5.02□□□□□ -1.61
SVIP-204ENST00000530199 GSTT2BP0CG30 244 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms