RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SIRPDQ9H106 197 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 RPRD1BQ9NQG5 326 aaKnown RBP4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF446Q9NWS9 450 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 C1orf123Q9NWV4 160 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 CYB5R1Q9UHQ9 305 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 B9D1Q9UPM9 204 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 KPTNQ9Y664 436 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 TRBV4-1A0A0J9YWV2 114 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 A0A1B0GVI7 797 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 C5orf63A6NC05 138 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 DCTN6O00399 190 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ARPC3O15145 178 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ATP6V0E1O15342 81 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 IDH3BO43837 385 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 OR10H3O60404 316 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 GMNNO75496 209 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 PAHP00439 452 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 GYPAP02724 150 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 HIST1H1CP16403 213 aaKnown RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF823P16415 610 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ANOS1P23352 680 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 SLC7A2P52569 658 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 SMIM11AP58511 58 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 FXYD6P3P58550 94 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 KRTAP10-3P60369 221 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 SSTP61278 116 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 MICBQ29980 383 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 RSPO1Q2MKA7 263 aaPredicted RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 RFX4Q33E94 735 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 SLC35D3Q5M8T2 416 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 TEX36Q5VZQ5 186 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 VMO1Q7Z5L0 202 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 TSEN54Q7Z6J9 526 aaKnown RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 STHQ8IWL8 128 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 PDZD9Q8IXQ8 264 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ZSCAN4Q8NAM6 433 aaPredicted RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 OR8S1Q8NH09 359 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 OR4K13Q8NH42 304 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 OR52J3Q8NH60 311 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 NPRL2Q8WTW4 380 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 NMNAT3Q96T66 252 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 KCTD14Q9BQ13 255 aaPredicted RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 COPS4Q9BT78 406 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 NSRP1Q9H0G5 558 aaKnown RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 OR52D1Q9H346 318 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 C16orf95Q9H693 158 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ONECUT1Q9UBC0 465 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 KAAG1Q9UBP8 84 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 RPUSD1Q9UJJ7 312 aaKnown RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 VPREB3Q9UKI3 123 aa4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
AMBRA1-209ENST00000529963 ANKRD30BLA7E2S9 258 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 NME4O00746 187 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 BHLHE40O14503 412 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 XRCC2O43543 280 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 DIRAS1O95057 198 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 DIRAS3O95661 229 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 MUC1P15941 1255 aaPredicted RBP4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 NCK1P16333 377 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 TGFBR2P37173 567 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 IFNGR2P38484 337 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 DDOSTP39656 456 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 NAA10P41227 235 aaPredicted RBP4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 GSK3BP49841 420 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 CRIP2P52943 208 aaPredicted RBP4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 SPIBQ01892 262 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF92Q03936 586 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 OPCMLQ14982 345 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 TAF13Q15543 124 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 SNAI3Q3KNW1 292 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 HSP90B2PQ58FF3 399 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 GLYATL3Q5SZD4 288 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 METAP1DQ6UB28 335 aaPredicted RBP4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 DRAM2Q6UX65 266 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF826PQ6ZT77 177 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 SLC36A1Q7Z2H8 476 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 NAA40Q86UY6 237 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 SDR9C7Q8NEX9 313 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 PROKR2Q8NFJ6 384 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 OR52L1Q8NGH7 329 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 OR56B2PQ8NGI1 322 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 OR4A16Q8NH70 328 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 OR2AE1Q8NHA4 323 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 LGALS12Q96DT0 336 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 ASCL2Q99929 193 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 VIPAS39Q9H9C1 493 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 EFCAB1Q9HAE3 211 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 SIRT7Q9NRC8 400 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 FGFR1OP2Q9NVK5 253 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 MDFICQ9P1T7 246 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNRD1Q9P1U0 126 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 U3KQV3 271 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 TENM3Q9P273 2699 aa4.07□□□□□ -1.76
AMBRA1-209ENST00000529963 IGHV3OR15-7A0A075B7D8 119 aa4.06□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF816-ZNF321PA0A0X1KG74 233 aa4.06□□□□□ -1.76
AMBRA1-209ENST00000529963 NKX6-3A6NJ46 265 aa4.06□□□□□ -1.76
AMBRA1-209ENST00000529963 TRIM64CA6NLI5 447 aa4.06□□□□□ -1.76
AMBRA1-209ENST00000529963 E5RGE8 158 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms