RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF729A6NN14 1252 aaPredicted RBP26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 BDH1Q02338 343 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 FAM189A2Q15884 450 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 PRAMEF5Q5TYX0 476 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 OR10K1Q8NGX5 313 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 THRSPQ92748 146 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 ZNF184Q99676 751 aaPredicted RBP26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 NPFFR1Q9GZQ6 430 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 PCDHB16Q9NRJ7 776 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 PITPNC1Q9UKF7 332 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 ERGIC3Q9Y282 383 aa26.68■■□□□ 1.86
SSSCA1-205ENST00000527920 TIMM23O14925 209 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 ZNF780AO75290 641 aaPredicted RBP26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 PIGYQ3MUY2 71 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 TREML4Q6UXN2 200 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 LINC00596Q86U02 117 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 ABHD12Q8N2K0 398 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 OR4D6Q8NGJ1 314 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 OR4P4Q8NGL7 312 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 ORAI1Q96D31 301 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 OR14A2Q96R54 314 aa26.67■■□□□ 1.86
SSSCA1-205ENST00000527920 A0A087X0M5 115 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 A0A1B0GX30 115 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 CHST1O43916 411 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 CDRT1O95170 752 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 HTR3BO95264 441 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 CELP19835 753 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 HTR1DP28221 377 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 RBM11P57052 281 aaKnown RBP26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 GABPB1Q06547 395 aaPredicted RBP26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 CDH26Q8IXH8 852 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 OSR2Q8N2R0 312 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 NDNFQ8TB73 568 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 ZNF596Q8TC21 504 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 S100A13Q99584 98 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 BARHL1Q9BZE3 327 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 PPIL3Q9H2H8 161 aaKnown RBP26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 FOXJ3Q9UPW0 622 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 ST3GAL6Q9Y274 331 aa26.66■■□□□ 1.86
SSSCA1-205ENST00000527920 TRAV8-7A0A075B6U6 113 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 CSTBP04080 98 aaKnown RBP26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 CGB3P0DN86 165 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 CGB7P0DN87 165 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 C6orf141Q5SZD1 244 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 ZNF565Q8N9K5 539 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 DERL3Q96Q80 235 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 NKX3-1Q99801 234 aaPredicted RBP26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 LINC00574Q9H8X3 128 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 ING4Q9UNL4 249 aa26.65■■□□□ 1.86
SSSCA1-205ENST00000527920 KBTBD11-OT1A0A1B0GTJ5 212 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 MEGF11A6BM72 1044 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 A6NDX4 124 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 IGLV1-47P01700 117 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 CDK1P06493 297 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 EFNB2P52799 333 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 PLA1AQ53H76 456 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 KIAA2026Q5HYC2 2103 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 NRG4Q8WWG1 115 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 TCF7L1Q9HCS4 588 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 DPM3Q9P2X0 92 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 KIF25Q9UIL4 384 aa26.64■■□□□ 1.86
SSSCA1-205ENST00000527920 M0QZ24 198 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 HSPB6O14558 160 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 GPR176Q14439 515 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 C17orf58Q2M2W7 97 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 MPV17LQ2QL34 196 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 RSBN1Q5VWQ0 802 aaPredicted RBP26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 OR2T6Q8NHC8 308 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 CREB3L1Q96BA8 519 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 MND1Q9BWT6 205 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 ING3Q9NXR8 418 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 HILPDAQ9Y5L2 63 aa26.63■■□□□ 1.85
SSSCA1-205ENST00000527920 MEIKINA0A087WXM9 373 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 PNMA8CA0A1B0GUJ8 204 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 MAGEA13PA6NCF6 341 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 MAPK3P27361 379 aaPredicted RBP26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 GDNFP39905 211 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 RAB13P51153 203 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 AQP4P55087 323 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 DOC2BQ14184 412 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 BAIAP2L2Q6UXY1 529 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 MYDGFQ969H8 173 aa26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 DPCDQ9BVM2 203 aaPredicted RBP26.62■■□□□ 1.85
SSSCA1-205ENST00000527920 FAM90A22PA8MWA6 464 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 F2RL2O00254 374 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 OR7C1O76099 320 aaPredicted RBP26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 GTF2F2P13984 249 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 CCBE1Q6UXH8 406 aaPredicted RBP26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 Q8N2B8 174 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 SUMF2Q8NBJ7 301 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 ZNF286AQ9HBT8 521 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 SCN3BQ9NY72 215 aa26.61■■□□□ 1.85
SSSCA1-205ENST00000527920 SERPINA2P20848 420 aa26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 GLP1RP43220 463 aa26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 OR13A1Q8NGR1 328 aa26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 PLPPR1Q8TBJ4 325 aa26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 MRPS24Q96EL2 167 aaKnown RBP26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 KIRREL1Q96J84 757 aa26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 CALYQ9NYX4 217 aa26.6■■□□□ 1.85
SSSCA1-205ENST00000527920 IL1AP01583 271 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms