RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 M0R1B8 84 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 FABP6P51161 128 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 TMEM211Q6ICI0 200 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 C17orf107Q6ZR85 190 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 FAM58AQ8N1B3 248 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 BARX1Q9HBU1 254 aaPredicted RBP13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 SH3BGRL2Q9UJC5 107 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 TRBV6-7A0A0A0MS04 114 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 DBX1A6NMT0 343 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 MPTX1A8MV57 137 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 LGALS8O00214 317 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 TIMM8AO60220 97 aaPredicted RBP13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 KITLGP21583 273 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 PSMB6P28072 239 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 MBNL2Q5VZF2 373 aaKnown RBP13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 Q8IYB0 196 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 DYRK2Q92630 601 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 SPACA1Q9HBV2 294 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 IGKV1D-8A0A087WSZ0 117 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 TMEM210A6NLX4 147 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 RHBDL1O75783 438 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 CRYAAP02489 173 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 NPY4RP50391 375 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 FAM27E3Q08E93 113 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 DAZAP2Q15038 168 aaPredicted RBP13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 TMEM128Q5BJH2 165 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 SCCPDHQ8NBX0 429 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 TMEM185AQ8NFB2 350 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 OR13G1Q8NGZ3 307 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF488Q96MN9 340 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 DMRTA2Q96SC8 542 aa13.8□□□□□ -0.2
SNRNP35-204ENST00000527158 TOR1AO14656 332 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 AKR1C4P17516 323 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 LHFPL1Q86WI0 220 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 MARC2Q969Z3 335 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 USB1Q9BQ65 265 aaKnown RBP13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF286AQ9HBT8 521 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 CHMP1AQ9HD42 196 aaPredicted RBP13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 NECAP2Q9NVZ3 263 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 ELOVL5Q9NYP7 299 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 FAM221AA4D161 298 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 F5H0A9 414 aaPredicted RBP13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 TPT1P13693 172 aaKnown RBP13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 VAMP1P23763 118 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 FPR2P25090 351 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 ECI1P42126 302 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 IL13RA2Q14627 380 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 IGFBP7Q16270 282 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 WDR86Q86TI4 376 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 SEC22AQ96IW7 307 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 FN3KRPQ9HA64 309 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 RAB18Q9NP72 206 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 IL36RNQ9UBH0 155 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 OSGIN2Q9Y236 505 aa13.79□□□□□ -0.2
SNRNP35-204ENST00000527158 TEX13DA0A0J9YY54 714 aaPredicted RBP13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 FAM25EA8MYX2 175 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 H0YL77 283 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 TSPAN9O75954 239 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 APOC3P02656 99 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 GRPP07492 148 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 DUSP1P28562 367 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF154Q13106 437 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 AADACL3Q5VUY0 350 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 ADAD2Q8NCV1 583 aaKnown RBP13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 NEK7Q8TDX7 302 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 CXXC4Q9H2H0 198 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 C5orf51A6NDU8 294 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 CCSO14618 274 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 CDIPTO14735 213 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 OR5H8P0DN80 308 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 SURF2Q15527 256 aaPredicted RBP13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 LRRC37A5PQ49AS3 106 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF2Q9BSG1 426 aaPredicted RBP13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 MBD2Q9UBB5 411 aa13.78□□□□□ -0.2
SNRNP35-204ENST00000527158 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.2
SNRNP35-204ENST00000527158 C16orf97H3BN30 126 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 FGF16O43320 207 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 PET100P0DJ07 73 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 EIF5AP63241 154 aaKnown RBP13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 SLC22A25Q6T423 547 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 PEG10Q86TG7 708 aaKnown RBP13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 CASTOR1Q8WTX7 329 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 PIK3IP1Q96FE7 263 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 WDR13Q9H1Z4 485 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 C5orf66Q9H5L9 145 aa13.77□□□□□ -0.21
SNRNP35-204ENST00000527158 MLNRO43193 412 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 SFT2D2O95562 160 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 GLAP06280 429 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 MZT1Q08AG7 82 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 KLRB1Q12918 225 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 RBM39Q14498 530 aaKnown RBP13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 KCTD9Q7L273 389 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 HSPB6O14558 160 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 ABCD4O14678 606 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms