RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 MND1Q9BWT6 205 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 BARHL1Q9BZE3 327 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 NPFFR1Q9GZQ6 430 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 SCN3BQ9NY72 215 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 FBLN5Q9UBX5 448 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 NKX1-2Q9UD57 310 aaPredicted RBP16.69■□□□□ 0.26
VPS28-206ENST00000526734 FOXJ3Q9UPW0 622 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 DSCAML1Q8TD84 2053 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 NBEAL1Q6ZS30 2694 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 H3BUI4 141 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 TIMM23O14925 209 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 HTR3BO95264 441 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 CDK1P06493 297 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 CELP19835 753 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 CDK2P24941 298 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 HTR1DP28221 377 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 GABRA5P31644 462 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 FAM189A2Q15884 450 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 LY6EQ16553 131 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 C6orf141Q5SZD1 244 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 ZNF565Q8N9K5 539 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 NDNFQ8TB73 568 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 ING4Q9UNL4 249 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 TCF19Q9Y242 345 aa16.68■□□□□ 0.26
VPS28-206ENST00000526734 TRAV24A0A0B4J272 114 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 KIR2DS4P43632 304 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 ARHGDIBP52566 201 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 RBM11P57052 281 aaKnown RBP16.67■□□□□ 0.26
VPS28-206ENST00000526734 SSX2Q16385 188 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 MPV17LQ2QL34 196 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 PRAMEF5Q5TYX0 476 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 ABHD12Q8N2K0 398 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 NKAIN3Q8N8D7 197 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 OR10K1Q8NGX5 313 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 PIFOQ8TCI5 191 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 MRPS24Q96EL2 167 aaKnown RBP16.67■□□□□ 0.26
VPS28-206ENST00000526734 OR14A2Q96R54 314 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 ST3GAL6Q9Y274 331 aa16.67■□□□□ 0.26
VPS28-206ENST00000526734 A0A087X0M5 115 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 KBTBD11-OT1A0A1B0GTJ5 212 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 A0A1B0GX30 115 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 CDRT1O95170 752 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 GTF2F2P13984 249 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 CEACAM3P40198 252 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 AQP4P55087 323 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 DOC2BQ14184 412 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 PIGYQ3MUY2 71 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 SLC35E4Q6ICL7 350 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 MS4A15Q8N5U1 240 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 DERL3Q96Q80 235 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 SPACA1Q9HBV2 294 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 DPM3Q9P2X0 92 aa16.66■□□□□ 0.26
VPS28-206ENST00000526734 TRAV8-7A0A075B6U6 113 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 MEIKINA0A087WXM9 373 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 M0QZ24 198 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 F2RL2O00254 374 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 MMP23AO75900 390 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 GLP1RP43220 463 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 HSPA13P48723 471 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 DYNAPQ8N1N2 210 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 OR10A7Q8NGE5 316 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 OR4P4Q8NGL7 312 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 OR2T6Q8NHC8 308 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 DPCDQ9BVM2 203 aaPredicted RBP16.65■□□□□ 0.26
VPS28-206ENST00000526734 PPIL3Q9H2H8 161 aaKnown RBP16.65■□□□□ 0.26
VPS28-206ENST00000526734 LINC00574Q9H8X3 128 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 KIF25Q9UIL4 384 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 TPRKBQ9Y3C4 175 aa16.65■□□□□ 0.26
VPS28-206ENST00000526734 PNMA8CA0A1B0GUJ8 204 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 MEGF11A6BM72 1044 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 A6NDX4 124 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 HSPB6O14558 160 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 OR7C1O76099 320 aaPredicted RBP16.64■□□□□ 0.25
VPS28-206ENST00000526734 IGLV1-47P01700 117 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 SERPINA2P20848 420 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 PRRX1P54821 245 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 LDLRAD2Q5SZI1 272 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 RSBN1Q5VWQ0 802 aaPredicted RBP16.64■□□□□ 0.25
VPS28-206ENST00000526734 JAGN1Q8N5M9 183 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 NRG4Q8WWG1 115 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 ORAI1Q96D31 301 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 ANKRD60Q9BZ19 345 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 TCF7L1Q9HCS4 588 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 ING3Q9NXR8 418 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 CALYQ9NYX4 217 aa16.64■□□□□ 0.25
VPS28-206ENST00000526734 MRPS28Q9Y2Q9 187 aaKnown RBP16.64■□□□□ 0.25
VPS28-206ENST00000526734 MGAM2Q2M2H8 2515 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 LEUTXA8MZ59 168 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 OOSP1A8MZH6 123 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 PTGES3LE9PB15 166 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 H0YHG0 523 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 TOR1AO14656 332 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 IL1AP01583 271 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 CGB3P0DN86 165 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 CGB7P0DN87 165 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 MYF6P23409 242 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 PAX6P26367 422 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 BRS3P32247 399 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 GPR50Q13585 617 aa16.63■□□□□ 0.25
VPS28-206ENST00000526734 SPHARQ15513 63 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms