RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ZNRF1Q8ND25 227 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 DNAAF1Q8NEP3 725 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 OR4M1Q8NGD0 313 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 AQP3Q92482 292 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 TAF15Q92804 592 aaKnown RBP eCLIP4.24□□□□□ -1.73
SVIP-202ENST00000525670 EMG1Q92979 244 aaKnown RBP4.24□□□□□ -1.73
SVIP-202ENST00000525670 TMEM203Q969S6 136 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 TMIGD2Q96BF3 282 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 MRPL48Q96GC5 212 aaKnown RBP4.24□□□□□ -1.73
SVIP-202ENST00000525670 URB1-AS1Q96HZ7 61 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 CYYR1Q96J86 154 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 OPALINQ96PE5 141 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 GAFA1Q96PS6 74 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 NR1H4Q96RI1 486 aaPredicted RBP4.24□□□□□ -1.73
SVIP-202ENST00000525670 GPER1Q99527 375 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 SLC6A7Q99884 636 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 PCGF1Q9BSM1 259 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 CHST6Q9GZX3 395 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 OR51I2Q9H344 312 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 FGF20Q9NP95 211 aaPredicted RBP4.24□□□□□ -1.73
SVIP-202ENST00000525670 C8orf4Q9NR00 106 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 SIRT7Q9NRC8 400 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 NLKQ9UBE8 527 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 PSORS1C1Q9UIG5 152 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 HHLA2Q9UM44 414 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 SLC7A11Q9UPY5 501 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 PCDHGB1Q9Y5G3 927 aa4.24□□□□□ -1.73
SVIP-202ENST00000525670 FBN1P35555 2871 aaKnown RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 IGKV1D-17A0A075B6S4 117 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TRAV38-1A0A0B4J264 116 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 A0A0G2JMP0 313 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 A0A0X1KG70 313 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 A0A1B0GWJ7 208 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 A0A1W2PQ09 198 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 IRGMA1A4Y4 181 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 OR5B21A6NL26 309 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 RFPL4AA6NLU0 287 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TMEM210A6NLX4 147 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TMEM212A6NML5 194 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 OR2AT4A6NND4 320 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SRRM5B3KS81 715 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 RFPL4AL1F8VTS6 287 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 CRLF1O75462 422 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 FOXH1O75593 365 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 CDRT1O95170 752 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 MAS1P04201 325 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 CDK1P06493 297 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 CCDC159P0C7I6 412 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 ATF1P18846 271 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 CELP19835 753 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 GABRR1P24046 479 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 PAX6P26367 422 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 OR3A4PP47883 348 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 NPBWR2P48146 333 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 DVL1P1P54792 670 aaPredicted RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 MTCP1P56278 107 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 WNT4P56705 351 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 FGF12P61328 243 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 ARF6P62330 175 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 RPS25P62851 125 aaKnown RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 SCN1BQ07699 218 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 MED21Q13503 144 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SNCBQ16143 134 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 DGUOKQ16854 277 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 MICBQ29980 383 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SMIM21Q3B7S5 101 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TMEM155Q4W5P6 130 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 RBM48Q5RL73 367 aaKnown RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 DDI2Q5TDH0 399 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TMEM244Q5VVB8 128 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 LIPKQ5VXJ0 399 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 WDR25Q64LD2 544 aaPredicted RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 STUMQ69YW2 141 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 ASPHD2Q6ICH7 369 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 USP43Q70EL4 1123 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 BTN2A1Q7KYR7 527 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SYS1Q8N2H4 156 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 PNKDQ8N490 385 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 PRR26Q8N8Z3 221 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SPERTQ8NA61 448 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 OR4M2Q8NGB6 313 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TNFAIP8L1Q8WVP5 186 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 TMEM106AQ96A25 262 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SMIM19Q96E16 107 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 ZNF184Q99676 751 aaPredicted RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 NUDT16L1Q9BRJ7 211 aaKnown RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 ANKRD60Q9BZ19 345 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 INPP5EQ9NRR6 644 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 SCN3BQ9NY72 215 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 ZNF581Q9P0T4 197 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 MIOXQ9UGB7 285 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 GSTK1Q9Y2Q3 226 aa4.23□□□□□ -1.73
SVIP-202ENST00000525670 CAB39Q9Y376 341 aaPredicted RBP4.23□□□□□ -1.73
SVIP-202ENST00000525670 TRAV8-7A0A075B6U6 113 aa4.22□□□□□ -1.73
SVIP-202ENST00000525670 IGHV2-70DA0A0C4DH43 119 aa4.22□□□□□ -1.73
SVIP-202ENST00000525670 IGKV1-12A0A0C4DH73 117 aa4.22□□□□□ -1.73
SVIP-202ENST00000525670 A0A1W2PP11 408 aa4.22□□□□□ -1.73
SVIP-202ENST00000525670 IFITM10A6NMD0 228 aa4.22□□□□□ -1.73
SVIP-202ENST00000525670 GABRPO00591 440 aa4.22□□□□□ -1.73
SVIP-202ENST00000525670 NDUFB3O43676 98 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms