RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MYO9AB2RTY4 2548 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CENPVL3A0A0U1RRI6 287 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 A0A1W2PPE3 182 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CCDC160A6NGH7 325 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 NOTOA8MTQ0 251 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 MCRIP1C9JLW8 97 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 RNASEK-C17orf49H0YIS7 233 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 AIPO00170 330 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 BPNT1O95861 308 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CD37P11049 281 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 MMP9P14780 707 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 HOXB4P17483 251 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 SRD5A1P18405 259 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 RCC1P18754 421 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 HNF1AP20823 631 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 EPHA1P21709 976 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 NFYBP25208 207 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 LMO1P25800 156 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CHATP28329 748 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 BLVRBP30043 206 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 SSTR5P35346 364 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 GNG10P50151 68 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 DLX6P56179 175 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 P2RX3P56373 397 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 TMEM50BP56557 158 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 DYNC1I2Q13409 638 aaKnown RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 GPR176Q14439 515 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 IL13RA2Q14627 380 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CTF1Q16619 201 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 PLAC9Q5JTB6 97 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 RSBN1Q5VWQ0 802 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 SFXN4Q6P4A7 337 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 Q6ZPA2 131 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 PRIMA1Q86XR5 153 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CDH26Q8IXH8 852 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 C11orf42Q8N5U0 333 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CHST4Q8NCG5 386 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 Q8NFD4 153 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 OR5D13Q8NGL4 314 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 KCNG3Q8TAE7 436 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 C8orf46Q8TAG6 207 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 SETD6Q8TBK2 473 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 UPRTQ96BW1 309 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ARHGAP5-AS1Q96IT6 56 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF48Q96MX3 618 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF714Q96N38 554 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 NEDD4LQ96PU5 975 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 SULT4A1Q9BR01 284 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 SUCNR1Q9BXA5 334 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 MS4A7Q9GZW8 240 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CST11Q9H112 138 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ATG5Q9H1Y0 275 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 CHMP1AQ9HD42 196 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ETAA1Q9NY74 926 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 IL36GQ9NZH8 169 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 POLR3KQ9Y2Y1 108 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 MAP1AP78559 2803 aaPredicted RBP3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 ARID1AO14497 2285 aa3.77□□□□□ -1.81
CHMP4A-202ENST00000524955 VPS13CQ709C8 3753 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 TRGV10A0A0A0MS01 117 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV1-69DA0A0B4J2H0 117 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 A0A0U1RQK1 487 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 hADV38S2A0JD32 116 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 ODAMA1E959 279 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 MEIS3P1A6NDR6 274 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 J3QLI3 93 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 LDLRAD4O15165 306 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF780AO75290 641 aaPredicted RBP3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 PDCD6O75340 191 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 GABARAPO95166 117 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 ECDO95905 644 aaPredicted RBP3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 FSHBP01225 129 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV1-69P01742 117 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 MT-ND4P03905 459 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 EIF4EP06730 217 aaKnown RBP3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 CD3GP09693 182 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 UBBP0CG47 229 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF728P0DKX0 622 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 GNB3P16520 340 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 FUT3P21217 361 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 GALP22466 123 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 GATA3P23771 443 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 CPT2P23786 658 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 CDK2P24941 298 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 RPL5P46777 297 aaKnown RBP3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 RBM39Q14498 530 aaKnown RBP3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 GNMTQ14749 295 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 C17orf58Q2M2W7 97 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 MPV17LQ2QL34 196 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 DEFB112Q30KQ8 113 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 TIMM50Q3ZCQ8 353 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 RNASE12Q5GAN4 147 aaKnown RBP3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 NHLRC3Q5JS37 347 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 LDLRAD2Q5SZI1 272 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 GPR157Q5UAW9 335 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 HCP5Q6MZN7 132 aa3.76□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF497Q6ZNH5 498 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms