RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 B9A039 149 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 PDCD6O75340 191 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 SFTA3P0C7M3 94 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 PSG4Q00888 419 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 MGAT2Q10469 447 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 MPPED2Q15777 294 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 VWA1Q6PCB0 445 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 BTNL8Q6UX41 500 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 IL34Q6ZMJ4 242 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 ACOT7LQ6ZUV0 252 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 PCGF1Q9BSM1 259 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 IGHV3OR15-7A0A075B7D8 119 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 SMAD7O15105 426 aaKnown RBP14.89□□□□□ -0.03
BEST1-203ENST00000524877 RFESDQ8TAC1 157 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 MS4A10Q96PG2 267 aa14.89□□□□□ -0.03
BEST1-203ENST00000524877 MRM2Q9UI43 246 aaKnown RBP14.89□□□□□ -0.03
BEST1-203ENST00000524877 SPNP16150 400 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 ZNF266Q14584 549 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 RNF133Q8WVZ7 376 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 PACRGQ96M98 296 aaPredicted RBP14.88□□□□□ -0.03
BEST1-203ENST00000524877 FFAR1O14842 300 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 HRH1P35367 487 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 FAM162BQ5T6X4 162 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 SLC26A10Q8NG04 563 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 AK3Q9UIJ7 227 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 GPR31O00270 319 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 PLPP2O43688 288 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 LINC00596Q86U02 117 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 C11orf42Q8N5U0 333 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 TAAR5O14804 337 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 XRCC3O43542 346 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 CSN1S1P47710 185 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 FFAR4Q5NUL3 377 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 NECAP1Q8NC96 275 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 OR51I2Q9H344 312 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 EPXP11678 715 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 ZNF738Q8NE65 137 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 TMED6Q8WW62 240 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 MOB3AQ96BX8 217 aa14.88□□□□□ -0.03
BEST1-203ENST00000524877 PSMB3P49720 205 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 GP2P55259 537 aaKnown RBP14.87□□□□□ -0.03
BEST1-203ENST00000524877 ERVFRD-1P60508 538 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 Q56UQ5 140 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 TMEM217Q8N7C4 229 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 PRSS12P56730 875 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 ACOT6Q3I5F7 207 aaPredicted RBP14.87□□□□□ -0.03
BEST1-203ENST00000524877 SLC39A9Q9NUM3 307 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 MRPS18CQ9Y3D5 142 aaKnown RBP14.87□□□□□ -0.03
BEST1-203ENST00000524877 IGHV3-43A0A0B4J1X8 118 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 RFPL3SP0C7P2 107 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 IGHV3-43DP0DP04 118 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 ADRA2CP18825 462 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 PMS2P11Q13670 270 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 TMEM268Q5VZI3 342 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 Q6ZT83 130 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 RNASE6Q93091 150 aaKnown RBP14.87□□□□□ -0.03
BEST1-203ENST00000524877 ADTRPQ96IZ2 230 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 F6UZH7 168 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 ZIC2O95409 532 aaPredicted RBP14.87□□□□□ -0.03
BEST1-203ENST00000524877 GABRB1P18505 474 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 CCDC144NLQ6NUI1 221 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 HSD17B13Q7Z5P4 300 aaPredicted RBP14.87□□□□□ -0.03
BEST1-203ENST00000524877 TVP23CQ96ET8 276 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 MED9Q9NWA0 146 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 RAB29O14966 203 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 ZFPL1O95159 310 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 DHRS11Q6UWP2 260 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 RHOFQ9HBH0 211 aa14.87□□□□□ -0.03
BEST1-203ENST00000524877 COL4A6Q14031 1691 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 CELA3AP09093 270 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 APOBEC3AP31941 199 aaPredicted RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 OR3A1P47881 315 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 GABRA4P48169 554 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 CDC34P49427 236 aaPredicted RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 BPIFB3P59826 476 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 PRSS53Q2L4Q9 553 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 TMEM45BQ96B21 275 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 SF3B6Q9Y3B4 125 aaKnown RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 STRAPQ9Y3F4 350 aaKnown RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 TMEM272A0A1B0GTI8 110 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 RPS4XP62701 263 aaKnown RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 ENDOGQ14249 297 aaKnown RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 MUC15Q8N387 334 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 OR2V2Q96R30 315 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 FKBP11Q9NYL4 201 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 MYO10Q9HD67 2058 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 ZNF250P15622 560 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 TIMM23BQ5SRD1 257 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 OR52N4Q8NGI2 321 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 ZNF331Q9NQX6 463 aaPredicted RBP14.86□□□□□ -0.03
BEST1-203ENST00000524877 SIP14410 1827 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 TRBV23-1A0A0A0MS06 115 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 RHOVQ96L33 236 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 WIPI2Q9Y4P8 454 aa14.86□□□□□ -0.03
BEST1-203ENST00000524877 XKRY2A2RUG3 117 aa14.85□□□□□ -0.03
BEST1-203ENST00000524877 ZFP92A6NM28 416 aa14.85□□□□□ -0.03
BEST1-203ENST00000524877 RNASEK-C17orf49H0YIS7 233 aa14.85□□□□□ -0.03
BEST1-203ENST00000524877 RRASP10301 218 aa14.85□□□□□ -0.03
BEST1-203ENST00000524877 DOLPP1Q86YN1 238 aa14.85□□□□□ -0.03
BEST1-203ENST00000524877 NDUFA2O43678 99 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms