RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PHYHO14832 338 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 MYL12BO14950 172 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PIN1P1O15428 100 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 XRCC2O43543 280 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PLPP2O43688 288 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TMCC2O75069 709 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF254O75437 659 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 FCN3O75636 299 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 GOSR1O95249 250 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 IGHV1-46P01743 117 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KRT8P05787 483 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 GATA1P15976 413 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CELP19835 753 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ANXA7P20073 488 aaKnown RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KITLGP21583 273 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PAX7P23759 505 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 COL8A2P25067 703 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PMELP40967 661 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 RAD52P43351 418 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TGM4P49221 684 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 RGS6P49758 472 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CCR9P51686 369 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 F2RL1P55085 397 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 WNT4P56705 351 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KLF3P57682 345 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ACTA2P62736 377 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 RPS25P62851 125 aaKnown RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ACTG2P63267 376 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CSNK2BP67870 215 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SLC3A1Q07837 685 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ACSM1Q08AH1 577 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ECH1Q13011 328 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 MAB21L1Q13394 359 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 MED22Q15528 200 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TAF13Q15543 124 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TBCEQ15813 527 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 UBE2V2Q15819 145 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 NEDD8Q15843 81 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KCTD21Q4G0X4 260 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 C1QTNF12Q5T7M4 302 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 FAM27D1Q5T7N8 215 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 BCL2L15Q5TBC7 163 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 UBE2UQ5VVX9 321 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PRAMEF6Q5VXH4 476 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 LIPKQ5VXJ0 399 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF544Q6NX49 715 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF773Q6PK81 442 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ARL9Q6T311 187 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TMEM91Q6ZNR0 172 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 DNM1P46Q6ZS02 220 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PGAP1Q75T13 922 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KRT74Q7RTS7 529 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 LYPD6Q86Y78 171 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 C11orf53Q8IXP5 236 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 OR8G5Q8NG78 346 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 OR51A2Q8NGJ7 313 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF420Q8TAQ5 688 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SYNPRQ8TBG9 265 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ST8SIA4Q92187 359 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 YIPF5Q969M3 257 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SPTSSAQ969W0 71 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 APOBEC3DQ96AK3 386 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TMIGD2Q96BF3 282 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 HAVCR1Q96D42 359 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SMIM19Q96E16 107 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PGAM5Q96HS1 289 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 GFI1Q99684 422 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KCNS3Q9BQ31 491 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SLC30A2Q9BRI3 323 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 MND1Q9BWT6 205 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CACNG6Q9BXT2 260 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 BCL2L14Q9BZR8 327 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CCDC90BQ9GZT6 254 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 NAA50Q9GZZ1 169 aaKnown RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 RNF167Q9H6Y7 350 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 MOB1AQ9H8S9 216 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SCPEP1Q9HB40 452 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 NGBQ9NPG2 151 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 RPS10P5Q9NQ39 176 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 INPP5EQ9NRR6 644 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 GPR173Q9NS66 373 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CBLN4Q9NTU7 201 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 BABAM2Q9NXR7 383 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SCN3BQ9NY72 215 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TREM2Q9NZC2 230 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TAAR3PQ9P1P4 343 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 GTF2A1LQ9UNN4 478 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 PIGLQ9Y2B2 252 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TPRKBQ9Y3C4 175 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 RHBDD3Q9Y3P4 386 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CMAHPQ9Y471 501 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SNX5Q9Y5X3 404 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TMEM14AQ9Y6G1 99 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 NSD1Q96L73 2696 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ANK2Q01484 3957 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 HERC2O95714 4834 aa2.4□□□□□ -2.02
CSDE1-208ENST00000524652 TRAV8-7A0A075B6U6 113 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 A0A087WW49 117 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms