RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 DPY30Q9C005 99 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 C11orf49Q9H6J7 331 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 LRTM1Q9HBL6 345 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ZDHHC4Q9NPG8 344 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CFL2Q9Y281 166 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ARL5AQ9Y689 179 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 V9GYQ6 96 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CCDC88CQ9P219 2028 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 LRP4O75096 1905 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 EFCAB10A6NFE3 127 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 FAM25AB3EWG3 89 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 FAM25CB3EWG5 89 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 FAM25GB3EWG6 89 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 INS-IGF2F8WCM5 200 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 H7C1H1 209 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 M0QZ92 97 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 PSMD11O00231 422 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 GABRPO00591 440 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 GNGT2O14610 69 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 RAD51BO15315 384 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 SCN2BO60939 215 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 NIPSNAP2O75323 286 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 CCNKO75909 580 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 APOA1P02647 267 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 MDKP21741 143 aaPredicted RBP3.8□□□□□ -1.8
SKP1-213ENST00000524288 PPIBP23284 216 aaKnown RBP3.8□□□□□ -1.8
SKP1-213ENST00000524288 CD82P27701 267 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 S100A5P33763 92 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 GNG2P59768 71 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 MAXP61244 160 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 COPZ1P61923 177 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 RPL38P63173 70 aaKnown RBP3.8□□□□□ -1.8
SKP1-213ENST00000524288 ZNF235Q14590 738 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 PGGHGQ32M88 737 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 YIF1BQ5BJH7 314 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 BEX5Q5H9J7 111 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 TPTE2P1Q5T6R2 138 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 SNX29P2Q8IUI4 249 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 TCTE3Q8IZS6 198 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 CMTM8Q8IZV2 173 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 SLC7A5P1Q8MH63 180 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 C10orf111Q8N326 155 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 ARRDC1Q8N5I2 433 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 PROKR2Q8NFJ6 384 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 OR7G1Q8NGA0 311 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 OR4K2Q8NGD2 314 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 OR52E2Q8NGJ4 325 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 LKAAEAR1Q8TD35 194 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 EEF1AKMT1Q8WVE0 214 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 SLC7A6Q92536 515 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 FOXC2Q99958 501 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 COPS4Q9BT78 406 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 CCDC90BQ9GZT6 254 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 FBXO44Q9H4M3 255 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 RGCCQ9H4X1 137 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 EDA2RQ9HAV5 297 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 DIABLOQ9NR28 239 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 ENOPH1Q9UHY7 261 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 POFUT2Q9Y2G5 429 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 YARS2Q9Y2Z4 477 aaKnown RBP3.8□□□□□ -1.8
SKP1-213ENST00000524288 LSM2Q9Y333 95 aaKnown RBP3.8□□□□□ -1.8
SKP1-213ENST00000524288 KCNE3Q9Y6H6 103 aa3.8□□□□□ -1.8
SKP1-213ENST00000524288 NUP214P35658 2090 aaPredicted RBP3.8□□□□□ -1.8
SKP1-213ENST00000524288 NUP210LQ5VU65 1888 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 COL4A2P08572 1712 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 DSPPQ9NZW4 1301 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 IGLV11-55A0A075B6I3 123 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 ARL5CA6NH57 179 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 H7C417 338 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 SEMA3DO95025 777 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 RAB3BP20337 219 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 HLA-DMAP28067 261 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 S100A3P33764 101 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 KDELR2P33947 212 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 CA5AP35218 305 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 TGFBR1P36897 503 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 RGS6P49758 472 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 OR2B6P58173 313 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 LSM3P62310 102 aaKnown RBP3.79□□□□□ -1.8
SKP1-213ENST00000524288 MGAT3Q09327 533 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 LRRC26Q2I0M4 334 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 C6orf183Q5T699 404 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 STUMQ69YW2 141 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 CEMP1Q6PRD7 247 aaPredicted RBP3.79□□□□□ -1.8
SKP1-213ENST00000524288 ARL9Q6T311 187 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 SCIMPQ6UWF3 145 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 FBXW12Q6X9E4 464 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 MBOAT2Q6ZWT7 520 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 AHSA2Q719I0 299 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 FAM122BQ7Z309 247 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 GLT6D1Q7Z4J2 308 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 HORMAD1Q86X24 394 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 TCAIMQ8N3R3 496 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 OR8J2Q8NGG1 315 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 ZNF675Q8TD23 568 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 DNAJB3Q8WWF6 145 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 FAM210BQ96KR6 192 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 JSRP1Q96MG2 331 aaPredicted RBP3.79□□□□□ -1.8
SKP1-213ENST00000524288 TRNT1Q96Q11 434 aaKnown RBP3.79□□□□□ -1.8
SKP1-213ENST00000524288 OR52E6Q96RD3 313 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms