RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PRR20CP86479 221 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 PRR20DP86480 221 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 PRR20BP86481 221 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 PRR20AP86496 221 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 KRBOX4Q5JUW0 171 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 SAMD4BQ5PRF9 694 aaKnown RBP10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 RASSF6Q6ZTQ3 369 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 ARPINQ7Z6K5 226 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 MINDY2Q8NBR6 621 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 OR2T33Q8NG76 320 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 FLYWCH2Q96CP2 140 aaKnown RBP10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 BTBD10Q9BSF8 475 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 OSBPL10Q9BXB5 764 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 PPIL3Q9H2H8 161 aaKnown RBP10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 SIGLEC8Q9NYZ4 499 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 IDI2-AS1Q9NZ38 188 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 MRM2Q9UI43 246 aaKnown RBP10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 COPS3Q9UNS2 423 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 DNAH11Q96DT5 4516 aa10.52□□□□□ -0.72
NKX3-1-202ENST00000523261 DYNC1H1Q14204 4646 aaKnown RBP10.52□□□□□ -0.72
NKX3-1-202ENST00000523261 TRAV41A0A0B4J266 112 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 A0A1B0GTI1 187 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 A0A1W2PPE3 182 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 ARPC1BO15143 372 aaKnown RBP10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 SOX15O60248 233 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 SLC2A2P11168 524 aaPredicted RBP10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 BCL3P20749 454 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 SF3A3Q12874 501 aaKnown RBP eCLIP10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 BNIP1Q12981 228 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 UBE2V2Q15819 145 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 DEGS2Q6QHC5 323 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 Q6ZSR3 168 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 OTULINQ96BN8 352 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 LINC00574Q9H8X3 128 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 EXOSC4Q9NPD3 245 aaKnown RBP10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 ARMC1Q9NVT9 282 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 CALYQ9NYX4 217 aa10.52□□□□□ -0.73
NKX3-1-202ENST00000523261 IZUMO1RA6ND01 250 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 DHRS7CA6NNS2 312 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 SH2D1BO14796 132 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 IL1AP01583 271 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 SEMG1P04279 462 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 RRM2P31350 389 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 GLP1RP43220 463 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 HCCSP53701 268 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 LTC4SQ16873 150 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 IL34Q6ZMJ4 242 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 OR13A1Q8NGR1 328 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 CASTOR1Q8WTX7 329 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 ZCCHC4Q9H5U6 513 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 HMG20AQ9NP66 347 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 PARP11Q9NR21 331 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 LAMP5Q9UJQ1 280 aa10.51□□□□□ -0.73
NKX3-1-202ENST00000523261 HERC1Q15751 4861 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 PRR32B1ATL7 298 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 NPIPB11E5RHQ5 1161 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 SOX14O95416 240 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 IGHV3-11P01762 117 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 HTR1FP30939 366 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 FUT6P51993 359 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 RAB40BQ12829 278 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 ATXN7L3Q14CW9 347 aaPredicted RBP10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 MAPRE2Q15555 327 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 LCN12Q6JVE5 192 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 SLC16A12Q6ZSM3 486 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 LINC00336Q6ZUF6 198 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 YIPF7Q8N8F6 280 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 RTN4IP1Q8WWV3 396 aaPredicted RBP10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 MBOAT4Q96T53 435 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 KRT84Q9NSB2 600 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 SAMD4AQ9UPU9 718 aaKnown RBP10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 GSTK1Q9Y2Q3 226 aa10.5□□□□□ -0.73
NKX3-1-202ENST00000523261 A0A0G2JND7 137 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 SRSF10O75494 262 aaKnown RBP10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 TPPPO94811 219 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 GASTP01350 101 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 CD81P60033 236 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 ROM1Q03395 351 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 ZNF829Q3KNS6 432 aaPredicted RBP10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 ELMOD2Q8IZ81 293 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 Q8N402 240 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 RFESDQ8TAC1 157 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 RGP1Q92546 391 aaPredicted RBP10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 RCN3Q96D15 328 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 MROQ9BYG7 248 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 COMMD4Q9H0A8 199 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 SLC25A19Q9HC21 320 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 IL1RAPQ9NPH3 570 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 V9GYQ6 96 aa10.49□□□□□ -0.73
NKX3-1-202ENST00000523261 HSPG2P98160 4391 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 IGHV7-81A0A0B4J1V7 117 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 SLC33A1O00400 549 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms