RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 OR4F4Q96R69 305 aa12.96□□□□□ -0.33
IGHV3-42-201ENST00000520410 BARHL1Q9BZE3 327 aa12.96□□□□□ -0.33
IGHV3-42-201ENST00000520410 MMP28Q9H239 520 aa12.96□□□□□ -0.33
IGHV3-42-201ENST00000520410 KIF25Q9UIL4 384 aa12.96□□□□□ -0.33
IGHV3-42-201ENST00000520410 SH2D7A6NKC9 451 aaPredicted RBP12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 PRB2P02812 416 aaPredicted RBP12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 CSN2P05814 226 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 LPLP06858 475 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 PF4V1P10720 104 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 SERPINA2P20848 420 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 LMO1P25800 156 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 BDH1Q02338 343 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 MED21Q13503 144 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 HES1Q14469 280 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 HLA-DRB5Q30154 266 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 PIGYQ3MUY2 71 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 TPTE2P1Q5T6R2 138 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 DDI2Q5TDH0 399 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 RPL22L1Q6P5R6 122 aaKnown RBP12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 ZNF565Q8N9K5 539 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 MRGPRDQ8TDS7 321 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 CORO2AQ92828 525 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 LEAP2Q969E1 77 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 TMEM106AQ96A25 262 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 CALYQ9NYX4 217 aa12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
IGHV3-42-201ENST00000520410 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 IRGMA1A4Y4 181 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 E9PQ18 207 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 BUB1B-PAK6H3BSN5 160 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 XPNPEP2O43895 674 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 CDRT1O95170 752 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 CLIC3O95833 236 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 ETV1P50549 477 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 CDK5R1Q15078 307 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 ATAD3CQ5T2N8 411 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 XAF1Q6GPH4 301 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 CCDC144NLQ6NUI1 221 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 Q8N2B8 174 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR5AU1Q8NGC0 362 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR13A1Q8NGR1 328 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 SGCDQ92629 289 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 METTL9Q9H1A3 318 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 LIN7BQ9HAP6 207 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 IDI2-AS1Q9NZ38 188 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 TRRAPQ9Y4A5 3859 aa12.94□□□□□ -0.34
IGHV3-42-201ENST00000520410 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 PNMA8CA0A1B0GUJ8 204 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 PF4P02776 101 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 CD33P20138 364 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 ZNF93P35789 620 aaPredicted RBP12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 IL13RA2Q14627 380 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 PXT1Q8NFP0 134 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR13C5Q8NGS8 318 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR9G1Q8NH87 305 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 RFESDQ8TAC1 157 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 RGP1Q92546 391 aaPredicted RBP12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 ORAI1Q96D31 301 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 KIRREL1Q96J84 757 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 CKLFQ9UBR5 152 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 ST3GAL6Q9Y274 331 aa12.93□□□□□ -0.34
IGHV3-42-201ENST00000520410 TCRBV4S1A1TA0A5B7 111 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 ALX3O95076 343 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 IGLV1-47P01700 117 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 DCKP27707 260 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 BDKRB2P30411 391 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 RIPK1Q13546 671 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 CCDC58Q4VC31 144 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 OSR2Q8N2R0 312 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 ZFP41Q8N8Y5 198 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 SETD9Q8NE22 299 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR51T1Q8NGJ9 327 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR10X1Q8NGY0 326 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 PLPPR1Q8TBJ4 325 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 ZNF649Q9BS31 505 aa12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 DPCDQ9BVM2 203 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 FGF20Q9NP95 211 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
IGHV3-42-201ENST00000520410 TRAV24A0A0B4J272 114 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 WBP4O75554 376 aaKnown RBP12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 OR2F2O95006 317 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 IL1AP01583 271 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 FAM106CPP0CH98 169 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 CD34P28906 385 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 SSTR5P35346 364 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 BEAN1Q3B7T3 259 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 OXLD1Q5BKU9 147 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 ELP2Q6IA86 826 aa12.91□□□□□ -0.34
IGHV3-42-201ENST00000520410 SUMF2Q8NBJ7 301 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms