RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 BCORP1Q8N888 145 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
PABPC1-208ENST00000519004 RNF2Q99496 336 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 CST9LQ9H4G1 147 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 FAM60AQ9NP50 221 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 RNF114Q9Y508 228 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 PHF1O43189 567 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF823P16415 610 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
PABPC1-208ENST00000519004 SHBQ15464 509 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 SPATA45Q537H7 98 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 Q6ZN92 141 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 C1QL2Q7Z5L3 287 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 OR11L1Q8NGX0 322 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 RNF133Q8WVZ7 376 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 OR2A5Q96R48 311 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 KIR3DX1Q9H7L2 352 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 HLA-HP01893 362 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 ADMP35318 185 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 EFNA3P52797 238 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 CLDN17P56750 224 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 FXYD4P59646 89 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-208ENST00000519004 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 OR51E1Q8TCB6 317 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 SSC4DQ8WTU2 575 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 IRF7Q92985 503 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 LOXL4Q96JB6 756 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 TXNIPQ9H3M7 391 aa11.74□□□□□ -0.53
PABPC1-208ENST00000519004 CPAMD8Q8IZJ3 1885 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 TMEM52BQ4KMG9 183 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 FAM78BQ5VT40 261 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 CNKSR3Q6P9H4 555 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 MEX3BQ6ZN04 569 aaKnown RBP11.73□□□□□ -0.53
PABPC1-208ENST00000519004 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 C1orf174Q8IYL3 243 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 SAXO1Q8IYX7 474 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 GPER1Q99527 375 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 TXN2Q99757 166 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 SLC46A2Q9BY10 475 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 PARLQ9H300 379 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 USP34Q70CQ2 3546 aa11.73□□□□□ -0.53
PABPC1-208ENST00000519004 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 A0A0U1RQK1 487 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 A0A1W2PRU2 124 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF320A2RRD8 509 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 OR6C6A6NF89 314 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 TNFSF12O43508 249 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 IFNA1P01562 189 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 SLC35E2P0CK97 266 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 HINT1P49773 126 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-208ENST00000519004 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 OR5T1Q8NG75 326 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 RSG1Q9BU20 258 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
PABPC1-208ENST00000519004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.72□□□□□ -0.532e-14■■■□□ 19.2
PABPC1-208ENST00000519004 FBXL7Q9UJT9 491 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 A0A1W2PNV4 684 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 TNFRSF10CO14798 259 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF737O75373 536 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 SERF1AO75920 110 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 GYPAP02724 150 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 PRNPP04156 253 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 SLC6A8P48029 635 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 FMODQ06828 376 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 SGCBQ16585 318 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 LY6G5CQ5SRR4 150 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 CRIP3Q6Q6R5 217 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 FAM57BQ71RH2 274 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 SLC38A9Q8NBW4 561 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 THAP3Q8WTV1 239 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-208ENST00000519004 OR10A5Q9H207 317 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 RBM7Q9Y580 266 aaKnown RBP11.72□□□□□ -0.53
PABPC1-208ENST00000519004 SPACA6W5XKT8 324 aa11.72□□□□□ -0.53
PABPC1-208ENST00000519004 IGKV1-9A0A0C4DH69 117 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 CCDC163A0A0D9SF12 145 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 CD46P15529 392 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF10P21506 573 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-208ENST00000519004 BMP5P22003 454 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 TNFSF4P23510 183 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 MPLP40238 635 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 MEF2BQ02080 365 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-208ENST00000519004 CA13Q8N1Q1 262 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 OR56B2PQ8NGI1 322 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 ZBP1Q9H171 429 aa11.71□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF703Q9H7S9 590 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-208ENST00000519004 TRAV34A0A0B4J273 112 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF814B7Z6K7 855 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TIAF1O95411 115 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 PDGFBP01127 241 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms