RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CYHR1Q6ZMK1 362 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 SLC25A45Q8N413 288 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 OR2Y1Q8NGV0 311 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 TMEM239Q8WW34 195 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 CMBLQ96DG6 245 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 LINC01587Q99440 93 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 XKR8Q9H6D3 395 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 TRBV24-1A0A075B6N3 115 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 GOLGA8IPA6NC78 632 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 OR5H14A6NHG9 310 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 RNASEK-C17orf49H0YIS7 233 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 H3BP45 60 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 APOA1P02647 267 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 CCL2P13500 99 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 GABRA1P14867 456 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 CBX5P45973 191 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 PLTPP55058 493 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 RAB25P57735 213 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 TRAM1Q15629 374 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 CEACAM21Q3KPI0 293 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 SPNS3Q6ZMD2 512 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 Q6ZT83 130 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 LYPD6Q86Y78 171 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 ZIC4Q8N9L1 334 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 FER1L6-AS1Q8NA97 138 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 MAL2Q969L2 176 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 RAD51AP1Q96B01 352 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 SIKE1Q9BRV8 207 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 OR2D2Q9H210 308 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 HAUS4Q9H6D7 363 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 CYB5R1Q9UHQ9 305 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 STK38LQ9Y2H1 464 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 MMACHCQ9Y4U1 282 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 ZNF407Q9C0G0 2248 aa1.94□□□□□ -2.1
SQLE-202ENST00000518604 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 IGKV1D-37A0A075B6S9 117 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 A0A1W2PNM2 257 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 A0A1W2PRG6 482 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 FAM183AA6NL82 134 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 TMEM250H0YL14 139 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 CDIPTO14735 213 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 SOX14O95416 240 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 CST4P01036 141 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 PSKH1P11801 424 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 CTLA4P16410 223 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 TSPOP30536 169 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 CD164Q04900 197 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 TPBGQ13641 420 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 FAM162BQ5T6X4 162 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 FAM183BPQ6ZVS7 135 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 MRPL52Q86TS9 123 aaKnown RBP1.93□□□□□ -2.1
SQLE-202ENST00000518604 MARCH3Q86UD3 253 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 NIT1Q86X76 327 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 C10orf107Q8IVU9 208 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 CLDN23Q96B33 292 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 B9D2Q9BPU9 175 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 MFSD1Q9H3U5 465 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 NXT1Q9UKK6 140 aaKnown RBP1.93□□□□□ -2.1
SQLE-202ENST00000518604 U3KQK5 164 aa1.93□□□□□ -2.1
SQLE-202ENST00000518604 ARAP3Q8WWN8 1544 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 MIA3Q5JRA6 1907 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 A0A1B0GW15 77 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 F8VP50 259 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 SHOX2O60902 331 aaPredicted RBP1.92□□□□□ -2.1
SQLE-202ENST00000518604 DEDDO75618 318 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 IGKV5-2P06315 115 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 GUSBP08236 651 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 CTSGP08311 255 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 PYCR1P32322 319 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 KCNJ3P48549 501 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 C1QTNF8P60827 252 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 RHOAP61586 193 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 FBXO48Q5FWF7 155 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 AADACL4Q5VUY2 407 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 CDRT4Q8N9R6 151 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 OR8K1Q8NGG5 319 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 OR2AE1Q8NHA4 323 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 DTD1Q8TEA8 209 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 IFT81Q8WYA0 676 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 CCDC124Q96CT7 223 aaKnown RBP1.92□□□□□ -2.1
SQLE-202ENST00000518604 C19orf60Q96EN9 201 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 CPB2Q96IY4 423 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 STACQ99469 402 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 PRRG3Q9BZD7 231 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 MAT2BQ9NZL9 334 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 OR5V1Q9UGF6 321 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 POMPQ9Y244 141 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 BRD4O60885 1362 aaPredicted RBP1.92□□□□□ -2.1
SQLE-202ENST00000518604 DYSFO75923 2080 aa1.92□□□□□ -2.1
SQLE-202ENST00000518604 VWA8A3KMH1 1905 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 LOC100506127A0A0U1RQW1 187 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 A6NED7 52 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 FABP7O15540 132 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 GYPCP04921 128 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 TPM1P09493 284 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 UGT2B10P36537 528 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 MAGEA3P43357 314 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 PRDX1Q06830 199 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms