RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ATP6V0D1P61421 351 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 HMGN5P82970 282 aaKnown RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TPRXLQ17RH7 258 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 GOLGA7BQ2TAP0 167 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 DEFB115Q30KQ5 88 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CEACAM21Q3KPI0 293 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TIMM23BQ5SRD1 257 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 BZW1Q7L1Q6 419 aaKnown RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 FAM122BQ7Z309 247 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ZIC4Q8N9L1 334 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MBOAT7Q96N66 472 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TSNAXQ99598 290 aaKnown RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TIMM21Q9BVV7 248 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 COA1Q9GZY4 146 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ARMC7Q9H6L4 198 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TXNL4BQ9NX01 149 aaKnown RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PSMD13Q9UNM6 376 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MYH11P35749 1972 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PCDH15Q96QU1 1955 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ATAD5Q96QE3 1844 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 LRRIQ4A6NIV6 560 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ARGFXA6NJG6 315 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TOR1AO14656 332 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ZNF705DP0CH99 300 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ZNF705BP0CI00 300 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 C2orf80Q0P641 193 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TSPAN31Q12999 210 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 KRTAP21-1Q3LI58 79 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 Q499Y3 187 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 NXNL2Q5VZ03 156 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SDIM1Q6ZPB5 146 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TPGS1Q6ZTW0 290 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 MARCH3Q86UD3 253 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CYP4Z1Q86W10 505 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 NELFCDQ8IXH7 590 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TRAM1L1Q8N609 369 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 NDNFQ8TB73 568 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 PDCD6IPQ8WUM4 868 aaKnown RBP0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CCDC77Q9BR77 488 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ANP32EQ9BTT0 268 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TAPBPLQ9BX59 468 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SLC38A1Q9H2H9 487 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 XKR8Q9H6D3 395 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 MRPS30Q9NP92 439 aaKnown RBP0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ADAMTSL3P82987 1691 aa0.21□□□□□ -2.38
RNU6-1088P-201ENST00000516850 MYOFQ9NZM1 2061 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 NRCAMQ92823 1304 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CRYGDP07320 174 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 OR4A8P0C604 315 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 NQO1P15559 274 aaKnown RBP0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CCR7P32248 378 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 EVI2BP34910 448 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 LPAR6P43657 344 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CLDN18P56856 261 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 RAB25P57735 213 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 MLF1P58340 268 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 RCN1Q15293 331 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 FAM27D1Q5T7N8 215 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ELP2Q6IA86 826 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 MICU2Q8IYU8 434 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TCP10LQ8TDR4 215 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 KCTD4Q8WVF5 259 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 C20orf144Q9BQM9 153 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SHCBP1LQ9BZQ2 653 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 WDR55Q9H6Y2 383 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 VCX3AQ9NNX9 186 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 C12orf4Q9NQ89 552 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ANXA10Q9UJ72 324 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ATRNO75882 1429 aa0.2□□□□□ -2.38
RNU6-1088P-201ENST00000516850 A0A1B0GVG6 124 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CD82P27701 267 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 GPR4P46093 362 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 RELAQ04206 551 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 OR8G1Q15617 311 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 EPGNQ6UW88 154 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 UNQ6190/PRO20217Q6UXQ8 127 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SETD3Q86TU7 594 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 KRTCAP2Q8N6L1 136 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ZFAND2AQ8N6M9 145 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 FAM184AQ8NB25 1140 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 OR52K1Q8NGK4 314 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 LHFPL5Q8TAF8 219 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SPPL2BQ8TCT7 592 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CD200R1Q8TD46 325 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CASTOR1Q8WTX7 329 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CLDN23Q96B33 292 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 TMIGD2Q96BF3 282 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 REEP6Q96HR9 211 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 LYRM4Q9HD34 91 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 RBM12B-AS1Q9P1G2 102 aa0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 PEF1Q9UBV8 284 aaKnown RBP0.19□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SPOPO43791 374 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 RAP1GDS1P52306 607 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 CTAG1AP78358 180 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 SKP2Q13309 424 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 FAM229BQ4G0N7 80 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 AGTRAPQ6RW13 159 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 Q6ZTI0 123 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 C2orf91Q6ZV80 131 aa0.18□□□□□ -2.38
RNU6-1088P-201ENST00000516850 ARL6IP6Q8N6S5 226 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms