RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 C21orf62Q9NYP8 219 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 TAS2R5Q9NYW4 299 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 RBM12B-AS1Q9P1G2 102 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 NYAP2Q9P242 653 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 HMGXB4Q9UGU5 601 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 TAC3Q9UHF0 121 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 RAB26Q9ULW5 256 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 TBL2Q9Y4P3 447 aaKnown RBP0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 POLR3HQ9Y535 204 aaPredicted RBP0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 YTHDF2Q9Y5A9 579 aaKnown RBP0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 SNX10Q9Y5X0 201 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 RFNGQ9Y644 331 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 ZNF780BQ9Y6R6 833 aa0.84□□□□□ -2.27
RN7SKP88-201ENST00000516847 NACAE9PAV3 2078 aa0.84□□□□□ -2.28
RN7SKP88-201ENST00000516847 BRD4O60885 1362 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 BAZ2AQ9UIF9 1905 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 YLPM1P49750 1951 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TP53BP1Q12888 1972 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ATRNO75882 1429 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PTPRKQ15262 1439 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TNS2Q63HR2 1409 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CABIN1Q9Y6J0 2220 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 IGKV1-6A0A0C4DH72 117 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TEX50A0A1B0GTY4 177 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 C8orf87E5RJ46 101 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 H3BP45 60 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 M0QZ92 97 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CXCR6O00574 342 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PFDN6O15212 129 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ACOX3O15254 700 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TGOLN2O43493 480 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 MED6O75586 246 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 POP7O75817 140 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 DCTN3O75935 186 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ATP6V1G2O95670 118 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 LHBP01229 141 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 IGKV1-39P01597 117 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 IGHV1-46P01743 117 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 HLA-DQB1P01920 261 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 IGKV1D-39P04432 117 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 IGKV5-2P06315 115 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SOD3P08294 240 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CTXN2P0C2S0 81 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 LINC00869P0C866 280 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 NTF3P20783 257 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CFL1P23528 166 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PSMA1P25786 263 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 MIPP30301 263 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SLC6A1P30531 599 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 IFNGR2P38484 337 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 MPV17P39210 176 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CDKN2CP42773 168 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SLCO1A2P46721 670 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 INPP1P49441 399 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZNF83P51522 516 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PSMD7P51665 324 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 RAP1GDS1P52306 607 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CLDN12P56749 244 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 DAD1P61803 113 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ELF3P78545 371 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZNF816Q0VGE8 651 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SKP2Q13309 424 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZNF235Q14590 738 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 EBPQ15125 230 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 MMDQ15546 238 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 UAP1Q16222 522 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SNRNP35Q16560 246 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SP6Q3SY56 376 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 LUZP6Q538Z0 58 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 AKIRIN2Q53H80 203 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SPIN4Q56A73 249 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TTMPQ5BVD1 217 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZNF678Q5SXM1 525 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZNF684Q5T5D7 378 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 HENMT1Q5T8I9 393 aaKnown RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 FAM71E1Q6IPT2 247 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TNFAIP8L2Q6P589 184 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PRSS54Q6PEW0 395 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TTC33Q6PID6 262 aaPredicted RBP0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CD200R1LQ6Q8B3 271 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 SCGB1D4Q6XE38 83 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CYHR1Q6ZMK1 362 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 CLEC20AQ6ZU45 233 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 FA2HQ7L5A8 372 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 OLIG3Q7RTU3 272 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 VN1R4Q7Z5H5 301 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PDPNQ86YL7 162 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 Q8N7P7 452 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 Q8N9L7 120 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR2M3Q8NG83 312 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR4C13Q8NGP0 309 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR51H1Q8NH63 302 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TWIST2Q8WVJ9 160 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ASB13Q8WXK3 278 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ESR2Q92731 530 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 YIPF5Q969M3 257 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 ITFG2Q969R8 447 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 TAMM41Q96BW9 452 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 PPCDCQ96CD2 204 aa0.83□□□□□ -2.28
RN7SKP88-201ENST00000516847 OPTNQ96CV9 577 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms