RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ASB17Q8WXJ9 295 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 AP3S1Q92572 193 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 RFKQ969G6 155 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM203Q969S6 136 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 RFT1Q96AA3 541 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 MRPS24Q96EL2 167 aaKnown RBP2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 RNFT2Q96EX2 444 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 POM121L2Q96KW2 1035 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 ALKBH3Q96Q83 286 aaPredicted RBP2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 ABHD1Q96SE0 405 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 NMNAT3Q96T66 252 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 GAL3ST1Q99999 423 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 BCL2L14Q9BZR8 327 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2H1Q9GZK4 316 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 WNT10AQ9GZT5 417 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 HDHD2Q9H0R4 259 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 SYT4Q9H2B2 425 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 MS4A5Q9H3V2 200 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 OPA3Q9H6K4 179 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 ELOVL3Q9HB03 270 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 PLEKHA1Q9HB21 404 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 IFT46Q9NQC8 304 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 NUDT15Q9NV35 164 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 COA4Q9NYJ1 87 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF224Q9NZL3 707 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 COMMD3Q9UBI1 195 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 EXTL2Q9UBQ6 330 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 CGGBP1Q9UFW8 167 aaPredicted RBP2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 UBQLN2Q9UHD9 624 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 IL20RAQ9UHF4 553 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 CYB5R1Q9UHQ9 305 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 GPR160Q9UJ42 338 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF391Q9UJN7 358 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 COPS3Q9UNS2 423 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 EXOGQ9Y2C4 368 aaKnown RBP2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 KCNK7Q9Y2U2 307 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 EXOSC1Q9Y3B2 195 aaKnown RBP2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 ADAM18Q9Y3Q7 739 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 NUBP2Q9Y5Y2 271 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM14AQ9Y6G1 99 aa2.49□□□□□ -2.01
SCARNA13-201ENST00000516672 IGLV3-9A0A075B6K5 115 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A096LPE4 126 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IGKV1D-43A0A0B4J1Z2 117 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IGHV2OR16-5A0A0B4J2B6 119 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A0U1RQK1 487 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A1W2PPZ6 126 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IRGMA1A4Y4 181 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 TSPAN4O14817 238 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 PHYHO14832 338 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SGCEO43556 437 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SYNGR3O43761 229 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CDC14BO60729 498 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 PEX14O75381 377 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF254O75437 659 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 RGS11O94810 467 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2A4O95047 310 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC2A10O95528 541 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 DHFRP00374 187 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IFNA7P01567 189 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IGHV3-13P01766 116 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MT-ND5P03915 603 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 TCRBP04435 133 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ADH4P08319 380 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SPARCP09486 303 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 GIPP09681 153 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CECR9P0C854 216 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 B4GALT1P15291 398 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF823P16415 610 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SPI1P17947 270 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ATF1P18846 271 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CPT2P23786 658 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 POU1F1P28069 291 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OTX1P32242 354 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CDAP32320 146 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 APLNRP35414 380 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CAPZA2P47755 286 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 GDI2P50395 445 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MECP2P51608 486 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CCR6P51684 374 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CRIP2P52943 208 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 UCP2P55851 309 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR10A3P58181 314 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 GRB2P62993 217 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 FLI1Q01543 452 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 BDH1Q02338 343 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ROM1Q03395 351 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 FMODQ06828 376 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 RIPPLY1Q0D2K3 151 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 RAB40BQ12829 278 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IL18Q14116 193 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CRMP1Q14194 572 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ENDOGQ14249 297 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MELKQ14680 651 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ICAM4Q14773 271 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OPCMLQ14982 345 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SNAPC1Q16533 368 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SGCAQ16586 387 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 PCGF3Q3KNV8 242 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 PABPC1L2AQ5JQF8 200 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CLEC12AQ5QGZ9 265 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms