RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 FOXRED1Q96CU9 486 aaPredicted RBP9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 ORAI1Q96D31 301 aa9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 CLEC7AQ9BXN2 247 aa9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 SLITRK2Q9H156 845 aa9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 TMEM133Q9H2Q1 129 aa9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 IFT22Q9H7X7 185 aa9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 MINOS1-NBL1R4GNA1 71 aa9.1□□□□□ -0.95
SCARNA16.1-201ENST00000516133 TRAV24A0A0B4J272 114 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 CLPSL1A2RUU4 121 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 VGLL3A8MV65 326 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 ODF3BA8MYP8 253 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 H3BUI4 141 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 H3BUX3 64 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 RGS10O43665 173 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 CLPXO76031 633 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 MAS1P04201 325 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 CRHBPP24387 322 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 CDK2P24941 298 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 RELBQ01201 579 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 IRF3Q14653 427 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 ATXN7L3Q14CW9 347 aaPredicted RBP9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 MPV17LQ2QL34 196 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 PIGYQ3MUY2 71 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 DHRS7BQ6IAN0 325 aaPredicted RBP9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 UNQ9370/PRO34162Q6UXP9 181 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 RTN4RL2Q86UN3 420 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 NKAIN3Q8N8D7 197 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 DTX3Q8N9I9 347 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 OR4D6Q8NGJ1 314 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 TAF15Q92804 592 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 COQ2Q96H96 371 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 OR5M11Q96RB7 305 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 UQCC2Q9BRT2 126 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 RAB18Q9NP72 206 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 LSM2Q9Y333 95 aaKnown RBP9.09□□□□□ -0.95
SCARNA16.1-201ENST00000516133 MEIKINA0A087WXM9 373 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 IGHV2-26A0A0B4J1V2 119 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 KBTBD11-OT1A0A1B0GTJ5 212 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 ZNF729A6NN14 1252 aaPredicted RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 HSPB6O14558 160 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 PIN1P1O15428 100 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 OR7C1O76099 320 aaPredicted RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 ATP6V1G2O95670 118 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 GZMHP20718 246 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SERPINA2P20848 420 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 HTR1DP28221 377 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 RBM11P57052 281 aaKnown RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 TPBGQ13641 420 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SSX2Q16385 188 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 RBM48Q5RL73 367 aaKnown RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 OLFML2AQ68BL7 652 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 GLIPR1L1Q6UWM5 242 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 LIAT1Q6ZQX7 453 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 PRSS48Q7RTY5 328 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CEACAM19Q7Z692 300 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 LHFPL4Q7Z7J7 247 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 ABHD12Q8N2K0 398 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 ZNF596Q8TC21 504 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 PHYHIPQ92561 330 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SGCDQ92629 289 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 UFD1Q92890 307 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 MUL1Q969V5 352 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CREB3L1Q96BA8 519 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CNBD2Q96M20 576 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 NKX3-1Q99801 234 aaPredicted RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 TMED9Q9BVK6 235 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 DPCDQ9BVM2 203 aaPredicted RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CCDC90BQ9GZT6 254 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SPACA1Q9HBV2 294 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 TCF7L1Q9HCS4 588 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 ISYNA1Q9NPH2 558 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 ING3Q9NXR8 418 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 KIF25Q9UIL4 384 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 RAB26Q9ULW5 256 aa9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 MRPS28Q9Y2Q9 187 aaKnown RBP9.08□□□□□ -0.96
SCARNA16.1-201ENST00000516133 MAGEA13PA6NCF6 341 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 GEMIN2O14893 280 aaKnown RBP9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 MMP23AO75900 390 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 TSPAN9O75954 239 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 HSMCR30P0CW71 290 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CGB3P0DN86 165 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CGB7P0DN87 165 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SRMP19623 302 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 PSMA1P25786 263 aaKnown RBP9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 CD34P28906 385 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 VHLP40337 213 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 DYNLT3P51808 116 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 PRRX1P54821 245 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 TRAM1Q15629 374 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 FAM189A2Q15884 450 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 LIPKQ5VXJ0 399 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 AWAT2Q6E213 333 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SLC35E4Q6ICL7 350 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 LYPD6Q86Y78 171 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 SUMF2Q8NBJ7 301 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 LINC01006Q8NI28 216 aa9.07□□□□□ -0.96
SCARNA16.1-201ENST00000516133 NDNFQ8TB73 568 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms