RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RAG2P55895 527 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 SCN1BQ07699 218 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 AESQ08117 197 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 MED22Q15528 200 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 MPV17LQ2QL34 196 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 LRRC75BQ2VPJ9 315 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 PIGYQ3MUY2 71 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 PAN3Q58A45 887 aaKnown RBP10.38□□□□□ -0.75
CLCN3-210ENST00000515420 MINOS1Q5TGZ0 78 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 LYPD6Q86Y78 171 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 OR10K1Q8NGX5 313 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 PHYHIPQ92561 330 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 MALSU1Q96EH3 234 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 NR1H4Q96RI1 486 aaPredicted RBP10.38□□□□□ -0.75
CLCN3-210ENST00000515420 UQCC2Q9BRT2 126 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 SLITRK2Q9H156 845 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 TMEM133Q9H2Q1 129 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 BEX1Q9HBH7 125 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 TNFRSF19Q9NS68 423 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 ING4Q9UNL4 249 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 ST3GAL6Q9Y274 331 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 IGHV2-26A0A0B4J1V2 119 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A10PA6NDY2 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A18PA6NE21 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A16PA6NEW6 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A20PA6NIJ5 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A7PA6NKC0 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A22PA8MWA6 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A12PA8MX19 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A5PA8MXJ8 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A23PA8MXZ1 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 MAS1P04201 325 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 ARG1P05089 322 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A15PP0C7V4 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A13PP0C7W8 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A14PP0C7W9 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A24PP0C7X0 464 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 PSMA1P25786 263 aaKnown RBP10.37□□□□□ -0.75
CLCN3-210ENST00000515420 CD34P28906 385 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 MLLT11Q13015 90 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-210ENST00000515420 TPBGQ13641 420 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 ATXN7L3Q14CW9 347 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-210ENST00000515420 TRAM1Q15629 374 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 TBCEQ15813 527 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-210ENST00000515420 ACSM3Q53FZ2 586 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 SHISA2Q6UWI4 295 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 RTN4RL2Q86UN3 420 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 JAGN1Q8N5M9 183 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 ZNF565Q8N9K5 539 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 C17orf50Q8WW18 174 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 SGCDQ92629 289 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 UFD1Q92890 307 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 CNBD2Q96M20 576 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 SSX3Q99909 188 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 CLEC7AQ9BXN2 247 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 LINC00574Q9H8X3 128 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 RAB18Q9NP72 206 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
CLCN3-210ENST00000515420 MRPS28Q9Y2Q9 187 aaKnown RBP10.37□□□□□ -0.75
CLCN3-210ENST00000515420 A0A087X0M5 115 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 A0A1B0GX30 115 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 A0A1W2PPK0 400 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 MEX3AA1L020 520 aaKnown RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 H3BUX3 64 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 MRPS14O60783 128 aaKnown RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 OR7C1O76099 320 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 CGB3P0DN86 165 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 CGB7P0DN87 165 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 SERPINA2P20848 420 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 MDKP21741 143 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 DYNLT3P51808 116 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 RELBQ01201 579 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 SLC22A6Q4U2R8 563 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 RSBN1Q5VWQ0 802 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 AWAT2Q6E213 333 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 DHRS7BQ6IAN0 325 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 OR4D6Q8NGJ1 314 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 ZNF596Q8TC21 504 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 MUL1Q969V5 352 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 NKX3-1Q99801 234 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-210ENST00000515420 Q9H521 79 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 C16orf95Q9H693 158 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 FBN3Q75N90 2809 aa10.36□□□□□ -0.75
CLCN3-210ENST00000515420 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 CLPSL1A2RUU4 121 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 H3BUI4 141 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
CLCN3-210ENST00000515420 TSPAN9O75954 239 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 UCHL1P09936 223 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 UBBP0CG47 229 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 CD37P11049 281 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 CPEP16870 476 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 CDK2P24941 298 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 GABARAPL2P60520 117 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 LIPKQ5VXJ0 399 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms