RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 RIF1Q5UIP0 2472 aaKnown RBP12.72□□□□□ -0.37
DDR1-271ENST00000513240 MSTNO14793 375 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 PGA5P0DJD9 388 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 CD37P11049 281 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 ZNF32P17041 273 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 CARD18P57730 90 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 DOK3Q7L591 496 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 PIGCQ92535 297 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 RAB39BQ96DA2 213 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 ZNF2Q9BSG1 426 aaPredicted RBP12.72□□□□□ -0.37
DDR1-271ENST00000513240 PECRQ9BY49 303 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 CNTNAP3Q9BZ76 1288 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
DDR1-271ENST00000513240 FAM166BA8MTA8 275 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 M0R143 59 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 CHATP28329 748 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 CAMLGP49069 296 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 AADACL3Q5VUY0 350 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 HOGA1Q86XE5 327 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 SUMF2Q8NBJ7 301 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 GJC3Q8NFK1 279 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 ASCL3Q9NQ33 180 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 ICE1Q9Y2F5 2266 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 H0YL77 283 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 CA11O75493 328 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.37
DDR1-271ENST00000513240 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 AARDQ4LEZ3 155 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 OPN5Q6U736 354 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 LINC00696Q6ZRV3 163 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 CRIM1Q9NZV1 1036 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
DDR1-271ENST00000513240 ESPL1Q14674 2120 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 TECTAO75443 2155 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 PRH1P02810 166 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 PPP1CCP36873 323 aaKnown RBP12.71□□□□□ -0.38
DDR1-271ENST00000513240 H3F3AP84243 136 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 SSBP1Q04837 148 aaKnown RBP12.71□□□□□ -0.38
DDR1-271ENST00000513240 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 NCR3LG1Q68D85 454 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 P4HTMQ9NXG6 502 aa12.71□□□□□ -0.38
DDR1-271ENST00000513240 LSM5Q9Y4Y9 91 aaKnown RBP12.71□□□□□ -0.38
DDR1-271ENST00000513240 OR4A8P0C604 315 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 HKR1P10072 659 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 GDF1P27539 372 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 CFPP27918 469 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 FOLR3P41439 243 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 CLDN15P56746 228 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
DDR1-271ENST00000513240 HIST3H3Q16695 136 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 MYPOPQ86VE0 399 aaPredicted RBP12.7□□□□□ -0.38
DDR1-271ENST00000513240 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 CDC6Q99741 560 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
DDR1-271ENST00000513240 GPR132Q9UNW8 380 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 RCL1Q9Y2P8 373 aaKnown RBP12.7□□□□□ -0.38
DDR1-271ENST00000513240 MRPS18CQ9Y3D5 142 aaKnown RBP12.7□□□□□ -0.38
DDR1-271ENST00000513240 DMXL2Q8TDJ6 3036 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 ZNF850A8MQ14 1090 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 LAMTOR5O43504 91 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 DIRAS3O95661 229 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 CST4P01036 141 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 UBE2KP61086 200 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 RPUSD3Q6P087 351 aaKnown RBP12.7□□□□□ -0.38
DDR1-271ENST00000513240 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
DDR1-271ENST00000513240 H3BQ15 152 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 TMEM127O75204 238 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 AMBPP02760 352 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 ARSJQ5FYB0 599 aaPredicted RBP12.69□□□□□ -0.38
DDR1-271ENST00000513240 AAED1Q7RTV5 226 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 TMEM123Q8N131 208 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 OR10D3Q8NH80 312 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 IL36RNQ9UBH0 155 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 NCKAP5O14513 1909 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 ADAMTS20P59510 1910 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 XRCC2O43543 280 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 DHRS3O75911 302 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
DDR1-271ENST00000513240 P04436 131 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 RPL29P47914 159 aaKnown RBP12.69□□□□□ -0.38
DDR1-271ENST00000513240 DSCR4P56555 118 aaPredicted RBP12.69□□□□□ -0.38
DDR1-271ENST00000513240 ZNF92Q03936 586 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 MAML2Q8IZL2 1156 aaPredicted RBP12.69□□□□□ -0.38
DDR1-271ENST00000513240 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
DDR1-271ENST00000513240 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 IGKV1D-12P01611 117 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 FGF5P12034 268 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 FCGR2CP31995 323 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 PTGER4P35408 488 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 NPBWR2P48146 333 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 HAGHQ16775 308 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 FBXL14Q8N1E6 418 aa12.68□□□□□ -0.38
DDR1-271ENST00000513240 ZDHHC22Q8N966 263 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms