RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ERP29P30040 261 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 OR3A1P47881 315 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 RBM11P57052 281 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 GUCA2AQ02747 115 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 EDDM3AQ14507 147 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 ZNF273Q14593 569 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 TUSC1Q2TAM9 212 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 PIGYQ3MUY2 71 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 SLC22A6Q4U2R8 563 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 NHLRC3Q5JS37 347 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 NCR3LG1Q68D85 454 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 AWAT2Q6E213 333 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 GLIPR1L1Q6UWM5 242 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 BRD3OSQ6XYD6 125 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 LINC00596Q86U02 117 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 LRRTM1Q86UE6 522 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 LYPD6Q86Y78 171 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 OR4D6Q8NGJ1 314 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 OR6Q1Q8NGQ2 317 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 TMEM158Q8WZ71 300 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 AP3S1Q92572 193 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 MRPS24Q96EL2 167 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 PPA2Q9H2U2 334 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 HEXA-AS1Q9H8Q6 139 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 UNKLQ9H9P5 680 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 AKIP1Q9NQ31 210 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 SIRT7Q9NRC8 400 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 ST3GAL6Q9Y274 331 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 PEX16Q9Y5Y5 336 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PP11 408 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 SMIM30A4D0T7 59 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 C17orf98A8MV24 154 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 RNASEK-C17orf49H0YIS7 233 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 HSPB6O14558 160 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 RGS5O15539 181 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 OR7C1O76099 320 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 VENTXO95231 258 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 RBP4P02753 201 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 UBBP0CG47 229 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 ZNF728P0DKX0 622 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 CD37P11049 281 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 CCL3L1P16619 93 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 CALRP27797 417 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 SDC2P34741 201 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 RPS19P39019 145 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 RANBP1P43487 201 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 KCNJ3P48549 501 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 PSMD7P51665 324 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 UBE2E1P51965 193 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 P2RX3P56373 397 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 HILS1P60008 231 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 ERVFRD-1P60508 538 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 AESQ08117 197 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 MPV17LQ2QL34 196 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 PAN3Q58A45 887 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 KRBOX4Q5JUW0 171 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 SPANXN2Q5MJ10 180 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 C1orf100Q5SVJ3 147 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 RUSC1-AS1Q66K80 236 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 CROCCP3Q8IVE0 287 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 PDZD9Q8IXQ8 264 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 C11orf42Q8N5U0 333 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 TPRX1Q8N7U7 411 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 SIGLECL1Q8N7X8 197 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 TNFRSF14Q92956 283 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 SLC25A46Q96AG3 418 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 ZNF714Q96N38 554 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 BARHL1Q9BZE3 327 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 NXF2Q9GZY0 626 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 IFT22Q9H7X7 185 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 PALMDQ9NP74 551 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 UBE2J1Q9Y385 318 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 LINC00312Q9Y6C7 94 aa5.86□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A075B6Q4 140 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 TRGV10A0A0A0MS01 117 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 TRAV24A0A0B4J272 114 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PRD5 423 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PRF3 423 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PRM7 423 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 ODAMA1E959 279 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 MEX3AA1L020 520 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 RNF212BA8MTL3 300 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 H3BUI4 141 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 TRIM77I1YAP6 450 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 J3QRK9 145 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 GEMIN2O14893 280 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 NPFFO15130 113 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 CRTAPO75718 401 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 CLEC2LP0C7M8 214 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 HTR2CP28335 458 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 GLIPR1P48060 266 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 DLX1P56177 255 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 DLX6P56179 175 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 SRSF2Q01130 221 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 PRB3Q04118 309 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 BAMBIQ13145 260 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 KLRD1Q13241 179 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 ATXN7L3Q14CW9 347 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 TAF9Q16594 264 aa5.85□□□□□ -1.47
PDLIM5-215ENST00000511586 DEFB112Q30KQ8 113 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms