RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 CFHR4Q92496 578 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 GGHQ92820 318 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 ORAI1Q96D31 301 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 CDCA4Q9BXL8 241 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 ANKRD60Q9BZ19 345 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 NPFFR1Q9GZQ6 430 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 SERTAD4Q9NUC0 356 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 EXOSC1Q9Y3B2 195 aaKnown RBP9.69□□□□□ -0.86
CHFR-208ENST00000511001 PCDHGB5Q9Y5G0 923 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 HILPDAQ9Y5L2 63 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
CHFR-208ENST00000511001 TRAV24A0A0B4J272 114 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 TRBV5-5A0A0J9YX44 114 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 IRGMA1A4Y4 181 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 FAM172BPA6NC97 362 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 TRIM64CA6NLI5 447 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 FAM90A22PA8MWA6 464 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 IGLV1-47P01700 117 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 RPS11P62280 158 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHFR-208ENST00000511001 LSAMPQ13449 338 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 DOC2BQ14184 412 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 HABP2Q14520 560 aaPredicted RBP9.68□□□□□ -0.86
CHFR-208ENST00000511001 ATXN7L3Q14CW9 347 aaPredicted RBP9.68□□□□□ -0.86
CHFR-208ENST00000511001 KCTD21Q4G0X4 260 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 KRBOX4Q5JUW0 171 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 DMKNQ6E0U4 476 aaPredicted RBP9.68□□□□□ -0.86
CHFR-208ENST00000511001 C11orf88Q6PI97 169 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 TMPRSS11AQ6ZMR5 421 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 Q6ZS46 218 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 SATL1Q86VE3 508 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 ABHD12Q8N2K0 398 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 SETD9Q8NE22 299 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 OR52N1Q8NH53 320 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 OR2T6Q8NHC8 308 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 NDNFQ8TB73 568 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 WIPF2Q8TF74 440 aaPredicted RBP9.68□□□□□ -0.86
CHFR-208ENST00000511001 TMEM106AQ96A25 262 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 SMIM19Q96E16 107 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 GAL3ST2Q9H3Q3 398 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 ZNF286AQ9HBT8 521 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 ABCB10Q9NRK6 738 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 BABAM2Q9NXR7 383 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 ING3Q9NXR8 418 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 ZNF581Q9P0T4 197 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
CHFR-208ENST00000511001 A0A087X0M5 115 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 A0A1B0GX30 115 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 ZNF729A6NN14 1252 aaPredicted RBP9.67□□□□□ -0.86
CHFR-208ENST00000511001 ZNF701M0R085 212 aaPredicted RBP9.67□□□□□ -0.86
CHFR-208ENST00000511001 TFAP2AP05549 437 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 CD2P06729 351 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 GNAO1P09471 354 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
CHFR-208ENST00000511001 HTR1DP28221 377 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 PTGFRP43088 359 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 OR3A4PP47883 348 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 BDH1Q02338 343 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 FBLN7Q53RD9 439 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 OR52W1Q6IF63 320 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 RTN4RL2Q86UN3 420 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 ZFP41Q8N8Y5 198 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 OR13A1Q8NGR1 328 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 PLPPR1Q8TBJ4 325 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 FBLIM1Q8WUP2 373 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 TMEM80Q96HE8 168 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 PGLYRP3Q96LB9 341 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 GPER1Q99527 375 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 YTHDF1Q9BYJ9 559 aaKnown RBP9.67□□□□□ -0.86
CHFR-208ENST00000511001 RBM38Q9H0Z9 239 aaKnown RBP9.67□□□□□ -0.86
CHFR-208ENST00000511001 NCOR1P1Q9H4R4 102 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 DPM3Q9P2X0 92 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 HSPE1-MOB4S4R3N1 261 aa9.67□□□□□ -0.86
CHFR-208ENST00000511001 HSPB6O14558 160 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 MAGEB3O15480 346 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 GPX5O75715 221 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 CDRT1O95170 752 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 HTR3BO95264 441 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 VSIG10L2P0DP72 767 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 MYL12AP19105 171 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 CAPGP40121 348 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 BLCAPP62952 87 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 PAX5Q02548 391 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 ST3GAL4Q11206 333 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 C2orf68Q2NKX9 166 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 HLA-DRB5Q30154 266 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 PAN3Q58A45 887 aaKnown RBP9.66□□□□□ -0.86
CHFR-208ENST00000511001 DDI2Q5TDH0 399 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 RSBN1Q5VWQ0 802 aaPredicted RBP9.66□□□□□ -0.86
CHFR-208ENST00000511001 Q6ZTK2 550 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 FAM110DQ8TAY7 271 aaPredicted RBP9.66□□□□□ -0.86
CHFR-208ENST00000511001 ZNF596Q8TC21 504 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 TFAP2CQ92754 450 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 GHSRQ92847 366 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 CPNE2Q96FN4 548 aaPredicted RBP9.66□□□□□ -0.86
CHFR-208ENST00000511001 KIRREL1Q96J84 757 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 TMEM138Q9NPI0 162 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 IL36GQ9NZH8 169 aa9.66□□□□□ -0.86
CHFR-208ENST00000511001 OR6C3Q9NZP0 311 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms