RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 J3QR06 171 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 LY86O95711 162 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 CSN2P05814 226 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 KIR3DL2P43630 455 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 GNG10P50151 68 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 RASSF2P50749 326 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 PDZK1IP1Q13113 114 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 MADCAM1Q13477 382 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 OR5D18Q8NGL1 313 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 UTP4Q969X6 686 aaKnown RBP12.55□□□□□ -0.4
CXCL1-202ENST00000509101 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 HRASLS5Q96KN8 279 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 RCHY1Q96PM5 261 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 SCOCQ9UIL1 159 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 ZNF256Q9Y2P7 627 aaPredicted RBP12.55□□□□□ -0.4
CXCL1-202ENST00000509101 SORL1Q92673 2214 aa12.55□□□□□ -0.4
CXCL1-202ENST00000509101 KBTBD11-OT1A0A1B0GTJ5 212 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 A0A1W2PQL4 384 aaPredicted RBP12.54□□□□□ -0.4
CXCL1-202ENST00000509101 METTL15A6NJ78 407 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 AP4M1O00189 453 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 SLC33A1O00400 549 aaPredicted RBP12.54□□□□□ -0.4
CXCL1-202ENST00000509101 HSPB6O14558 160 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 APOL3O95236 402 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 UBCP0CG48 685 aaKnown RBP12.54□□□□□ -0.4
CXCL1-202ENST00000509101 ATF1P18846 271 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 PRKACBP22694 351 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 RAB7AP51149 207 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 LTC4SQ16873 150 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 CXorf66Q5JRM2 361 aaPredicted RBP12.54□□□□□ -0.4
CXCL1-202ENST00000509101 Q6P435 159 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 RDH10Q8IZV5 341 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 OR8H3Q8N146 312 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 TMEM163Q8TC26 289 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 DNAJC9Q8WXX5 260 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 OPALINQ96PE5 141 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 SPACA5Q96QH8 159 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 CALYQ9NYX4 217 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
CXCL1-202ENST00000509101 LCE6AA0A183 80 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 KDM4BO94953 1096 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 OCM2P0CE71 109 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 OCMP0CE72 109 aaPredicted RBP12.53□□□□□ -0.4
CXCL1-202ENST00000509101 ZNF20P17024 532 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 GPR12P47775 334 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 DAPP51397 102 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 GPR50Q13585 617 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 KIR2DS1Q14954 304 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 UTS2BQ765I0 119 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 GID4Q8IVV7 300 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 CHST4Q8NCG5 386 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 IL4I1Q96RQ9 567 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 PALMDQ9NP74 551 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 IDI2-AS1Q9NZ38 188 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 SMAD5-AS1Q9Y6J3 95 aa12.53□□□□□ -0.4
CXCL1-202ENST00000509101 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 LYL1P12980 280 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.41
CXCL1-202ENST00000509101 FOXE3Q13461 319 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 C1orf146Q5VVC0 180 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 FAHD1Q6P587 224 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 SBSPONQ8IVN8 264 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 OR10H4Q8NGA5 316 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 SPSB1Q96BD6 273 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 FGGYQ96C11 551 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 KIF25Q9UIL4 384 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 GNG8Q9UK08 70 aa12.52□□□□□ -0.41
CXCL1-202ENST00000509101 MEIKINA0A087WXM9 373 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 NCBP2LA6PVI3 153 aaKnown RBP12.51□□□□□ -0.41
CXCL1-202ENST00000509101 HSD17B6O14756 317 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 DEGS1O15121 323 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 MITFO75030 526 aaPredicted RBP12.51□□□□□ -0.41
CXCL1-202ENST00000509101 SULT1C4O75897 302 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 IL1AP01583 271 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 CGB3P0DN86 165 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 CGB7P0DN87 165 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 HOXB6P17509 224 aaKnown RBP12.51□□□□□ -0.41
CXCL1-202ENST00000509101 EPHA2P29317 976 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 EFNB1P98172 346 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 TP53I3Q53FA7 332 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 C12orf73Q69YU5 71 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 OR13C9Q8NGT0 318 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 OR10X1Q8NGY0 326 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 HAVCR2Q8TDQ0 301 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 C4orf3Q8WVX3 66 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 OSBPL10Q9BXB5 764 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 GON7Q9BXV9 100 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 ABCG5Q9H222 651 aa12.51□□□□□ -0.41
CXCL1-202ENST00000509101 LIN7CQ9NUP9 197 aaKnown RBP12.51□□□□□ -0.41
CXCL1-202ENST00000509101 SIRT4Q9Y6E7 314 aaPredicted RBP12.51□□□□□ -0.41
CXCL1-202ENST00000509101 A0A1W2PPE3 182 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 H0YJX3 145 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 ELANEP08246 267 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 OR2T7P0C7T2 308 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms