RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 CEACAM3P40198 252 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 PTGFRP43088 359 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 ATXN7L3Q14CW9 347 aaPredicted RBP9.98□□□□□ -0.81
PDPN-208ENST00000509009 HLA-DRB5Q30154 266 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 TCTEX1D4Q5JR98 221 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 SATL1Q86VE3 508 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 ZNF565Q8N9K5 539 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 Q8NFD4 153 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 CNIH3Q8TBE1 160 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 APH1BQ8WW43 257 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 RBM14Q96PK6 669 aaKnown RBP9.98□□□□□ -0.81
PDPN-208ENST00000509009 SLC25A33Q9BSK2 321 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 LINC00574Q9H8X3 128 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 FGF20Q9NP95 211 aaPredicted RBP9.98□□□□□ -0.81
PDPN-208ENST00000509009 OOSP1A8MZH6 123 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 H0YJX3 145 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 WBP4O75554 376 aaKnown RBP9.97□□□□□ -0.81
PDPN-208ENST00000509009 OR2F2O95006 317 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 RAB3AP20336 220 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 NFYBP25208 207 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 OR3A4PP47883 348 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 SOX2P48431 317 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 ARHGDIBP52566 201 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 ABCA11PQ4W5N1 156 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 PAN3Q58A45 887 aaKnown RBP9.97□□□□□ -0.81
PDPN-208ENST00000509009 LPCAT4Q643R3 524 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 Q6ZPA2 131 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 THNSL2Q86YJ6 484 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 PQLC1Q8N2U9 271 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 OR51A2Q8NGJ7 313 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 OR13A1Q8NGR1 328 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 HAVCR2Q8TDQ0 301 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 TNFAIP8L1Q8WVP5 186 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 TSEN15Q8WW01 171 aaKnown RBP9.97□□□□□ -0.81
PDPN-208ENST00000509009 CAPSLQ8WWF8 208 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 RGP1Q92546 391 aaPredicted RBP9.97□□□□□ -0.81
PDPN-208ENST00000509009 KIRREL1Q96J84 757 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 JAM3Q9BX67 310 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 BARHL1Q9BZE3 327 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 KIF25Q9UIL4 384 aa9.97□□□□□ -0.81
PDPN-208ENST00000509009 MEIKINA0A087WXM9 373 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 A0A1W2PRX2 142 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A18PA6NE21 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A16PA6NEW6 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A20PA6NIJ5 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A9PA6NNJ1 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A12PA8MX19 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A5PA8MXJ8 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 J3QR06 171 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 GABRPO00591 440 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 HSPB6O14558 160 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 MAGEB3O15480 346 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 LPLP06858 475 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A15PP0C7V4 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A13PP0C7W8 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A14PP0C7W9 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 FAM90A24PP0C7X0 464 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 C21orf33P30042 268 aaPredicted RBP9.96□□□□□ -0.82
PDPN-208ENST00000509009 ETV1P50549 477 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 IL13RA2Q14627 380 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
PDPN-208ENST00000509009 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 XAF1Q6GPH4 301 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 RPL22L1Q6P5R6 122 aaKnown RBP9.96□□□□□ -0.82
PDPN-208ENST00000509009 REC114Q7Z4M0 266 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 OR10K1Q8NGX5 313 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 RFESDQ8TAC1 157 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 PLPPR1Q8TBJ4 325 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 GPR148Q8TDV2 347 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 GPER1Q99527 375 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 TAS2R4Q9NYW5 299 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 CALYQ9NYX4 217 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 PSG11Q9UQ72 335 aa9.96□□□□□ -0.82
PDPN-208ENST00000509009 SIRT4Q9Y6E7 314 aaPredicted RBP9.96□□□□□ -0.82
PDPN-208ENST00000509009 TCRBV4S1A1TA0A5B7 111 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 NPIPB11E5RHQ5 1161 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 OGG1O15527 345 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 CDRT1O95170 752 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 HTR3BO95264 441 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 IGHV3-7P01780 117 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 FAM106CPP0CH98 169 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 DCKP27707 260 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 MNDAP41218 407 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 GLP1RP43220 463 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 PAX5Q02548 391 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 RBM39Q14498 530 aaKnown RBP9.95□□□□□ -0.82
PDPN-208ENST00000509009 RSU1Q15404 277 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 PIGYQ3MUY2 71 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 CCDC58Q4VC31 144 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 RSBN1Q5VWQ0 802 aaPredicted RBP9.95□□□□□ -0.82
PDPN-208ENST00000509009 CCDC144NLQ6NUI1 221 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 SGCDQ92629 289 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 LEAP2Q969E1 77 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 CPNE2Q96FN4 548 aaPredicted RBP9.95□□□□□ -0.82
PDPN-208ENST00000509009 IDI2-AS1Q9NZ38 188 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.95□□□□□ -0.82
PDPN-208ENST00000509009 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms