RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF286AQ9HBT8 521 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 KIF25Q9UIL4 384 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 WNK1Q9H4A3 2382 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 MEIKINA0A087WXM9 373 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 TRAV39A0A0B4J263 110 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 IGHV3-7P01780 117 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 CSN2P05814 226 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 SERPINA2P20848 420 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF93P35789 620 aaPredicted RBP11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 DEFA6Q01524 100 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 OGFRL1Q5TC84 451 aaPredicted RBP11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 MINOS1Q5TGZ0 78 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 OR52W1Q6IF63 320 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 LAIR2Q6ISS4 152 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 Q6ZTK2 550 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 LYG1Q8N1E2 194 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 BPIFB6Q8NFQ5 453 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 OR4D6Q8NGJ1 314 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 OR13A1Q8NGR1 328 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 OR52N1Q8NH53 320 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 CORO2AQ92828 525 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 MMP27Q9H306 513 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 RANBP3Q9H6Z4 567 aaPredicted RBP11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF702PQ9H963 129 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 TMEM138Q9NPI0 162 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 TAS2R3Q9NYW6 316 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 MINOS1-NBL1R4GNA1 71 aa11.92□□□□□ -0.5
UBE2D3-228ENST00000508974 TOR1AO14656 332 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 BDKRB2P30411 391 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 RIPK1Q13546 671 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 HERPUD1Q15011 391 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 C17orf58Q2M2W7 97 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 DMKNQ6E0U4 476 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 ELP2Q6IA86 826 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 STX19Q8N4C7 294 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 OR51T1Q8NGJ9 327 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 LEAP2Q969E1 77 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 OR14A2Q96R54 314 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 S100A13Q99584 98 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF184Q99676 751 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 CDCA4Q9BXL8 241 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 ST3GAL6Q9Y274 331 aa11.91□□□□□ -0.5
UBE2D3-228ENST00000508974 TRAV8-7A0A075B6U6 113 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 TRBV5-5A0A0J9YX44 114 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 A0A1W2PP11 408 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 EFCAB10A6NFE3 127 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 MYL12BO14950 172 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 OR7C1O76099 320 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 CSTBP04080 98 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 ALDOBP05062 364 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 CSF1P09603 554 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 C21orf33P30042 268 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 DOC2BQ14184 412 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 IL13RA2Q14627 380 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 C2orf68Q2NKX9 166 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 TMEM95Q3KNT9 176 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 Q6ZS46 218 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 RTN4RL2Q86UN3 420 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 OSR2Q8N2R0 312 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 SUMF2Q8NBJ7 301 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF485Q8NCK3 441 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF596Q8TC21 504 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 MRGPRDQ8TDS7 321 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 PGLYRP3Q96LB9 341 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 CALYQ9NYX4 217 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 DPM3Q9P2X0 92 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 CKLFQ9UBR5 152 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 HSPE1-MOB4S4R3N1 261 aa11.9□□□□□ -0.5
UBE2D3-228ENST00000508974 GEMIN2O14893 280 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 PEX14O75381 377 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 IGLV1-47P01700 117 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 MAS1P04201 325 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 IGFBP3P17936 291 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 GNG10P50151 68 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 RBM11P57052 281 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 BLCAPP62952 87 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 BDH1Q02338 343 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 Q499Y3 187 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 SLC22A6Q4U2R8 563 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 FBLN7Q53RD9 439 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 YIF1BQ5BJH7 314 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 ATAD3CQ5T2N8 411 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 RSBN1Q5VWQ0 802 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 C1QL4Q86Z23 238 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 JAGN1Q8N5M9 183 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 RFESDQ8TAC1 157 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 NEK7Q8TDX7 302 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 MUL1Q969V5 352 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 KIRREL1Q96J84 757 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms