RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 RAB2AP61019 212 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 MPV17LQ2QL34 196 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 TRIM61Q5EBN2 209 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 TMEM252Q8N6L7 170 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 FGFBP3Q8TAT2 258 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 TCTEX1D2Q8WW35 142 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 TMEM45BQ96B21 275 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 FSCN3Q9NQT6 498 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
CAST-223ENST00000508608 A0A1B0GV50 99 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 A0A1W2PPE2 198 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ZNF724A8MTY0 619 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ZNF732B4DXR9 585 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ADAM20O43506 726 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 OR2C1O95371 312 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 NAPSAO96009 420 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ARG1P05089 322 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 VDAC1P21796 283 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 UCP1P25874 307 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ASCL1P50553 236 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 DUSP3P51452 185 aaPredicted RBP11.23□□□□□ -0.61
CAST-223ENST00000508608 FGF12P61328 243 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 TGIF1Q15583 401 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 COLCA1Q6ZS62 124 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.23□□□□□ -0.61
CAST-223ENST00000508608 CMTM1Q8IZ96 169 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 ZFP62Q8NB50 900 aaPredicted RBP11.23□□□□□ -0.61
CAST-223ENST00000508608 OR5C1Q8NGR4 320 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
CAST-223ENST00000508608 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
CAST-223ENST00000508608 AP4M1O00189 453 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 WRBO00258 174 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 GPR37O15354 613 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 CCL4P13236 92 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 BCL3P20749 454 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 OMGP23515 440 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 S100GP29377 79 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 NOVA1P51513 510 aaKnown RBP11.22□□□□□ -0.61
CAST-223ENST00000508608 DAZAP2Q15038 168 aaPredicted RBP11.22□□□□□ -0.61
CAST-223ENST00000508608 OR8G1Q15617 311 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 PMS2CLQ68D20 193 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 DPPA3Q6W0C5 159 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 RBMS3Q6XE24 437 aaKnown RBP11.22□□□□□ -0.61
CAST-223ENST00000508608 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 GAPTQ8N292 157 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 SLAMF9Q96A28 289 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 SDK2Q58EX2 2172 aa11.22□□□□□ -0.61
CAST-223ENST00000508608 A0A1W2PPE3 182 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 LRRC3CA6NJW4 275 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 ZNF587BE7ETH6 402 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 NTN3O00634 580 aaPredicted RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 ITGA3P26006 1051 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 RPS23P62266 143 aaKnown RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 PRDX4Q13162 271 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 SLC16A13Q7RTY0 426 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 IL22RA1Q8N6P7 574 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 OR56B2PQ8NGI1 322 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 OR5D13Q8NGL4 314 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 TNRC6AQ8NDV7 1962 aaKnown RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 PRUNE2Q8WUY3 3088 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 MED19A0JLT2 244 aaPredicted RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 SLC22A20A6NK97 555 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 H0Y980 276 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 TUSC2O75896 110 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 HBE1P02100 147 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 FABP1P07148 127 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 GDF1P27539 372 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 TLE4Q04727 773 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 AKR1C8PQ5T2L2 129 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 MKXQ8IYA7 352 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 ZDHHC23Q8IYP9 409 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 NEK7Q8TDX7 302 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 TMEM171Q8WVE6 324 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 RARRES2Q99969 163 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 RIMS4Q9H426 269 aaPredicted RBP11.21□□□□□ -0.61
CAST-223ENST00000508608 SIT1Q9Y3P8 196 aa11.21□□□□□ -0.61
CAST-223ENST00000508608 A0A087WWC5 75 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 CCDC163A0A0D9SF12 145 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 CDRT15L2A8MXV6 281 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 PROB1E7EW31 1015 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 MRPL33O75394 65 aaKnown RBP11.2□□□□□ -0.62
CAST-223ENST00000508608 RFPL3SP0C7P2 107 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 CEACAM1P13688 526 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 EIF2S3P41091 472 aaKnown RBP11.2□□□□□ -0.62
CAST-223ENST00000508608 HAAOP46952 286 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 DYNLT3P51808 116 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 ID3Q02535 119 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 ZFP36L1Q07352 338 aaKnown RBP11.2□□□□□ -0.62
CAST-223ENST00000508608 IL24Q13007 206 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 CXorf66Q5JRM2 361 aaPredicted RBP11.2□□□□□ -0.62
CAST-223ENST00000508608 MRPL21Q7Z2W9 205 aaKnown RBP11.2□□□□□ -0.62
CAST-223ENST00000508608 LINC00596Q86U02 117 aa11.2□□□□□ -0.62
CAST-223ENST00000508608 CPEB3Q8NE35 698 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms