RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 NXPH2O95156 264 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 IGHV1-69P01742 117 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 HTR1AP08908 422 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 GNAO1P09471 354 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 PPIAL4GP0DN37 164 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 PIPP12273 146 aaPredicted RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 MMP9P14780 707 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 OMGP23515 440 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 CPT2P23786 658 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 NPBWR2P48146 333 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 NPY4RP50391 375 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SNU13P55769 128 aaKnown RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 MTCP1P56278 107 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ISL1P61371 349 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 UBA52P62987 128 aaKnown RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 ACTG1P63261 375 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SCN1BQ07699 218 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 KLRD1Q13241 179 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SLC9A3R2Q15599 337 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SNCBQ16143 134 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 CDONQ4KMG0 1287 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 LRRC10Q5BKY1 277 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 METTL11BQ5VVY1 283 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 MEDAGQ5VYS4 303 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 TMEM42Q69YG0 159 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 RBMS3Q6XE24 437 aaKnown RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 ACP7Q6ZNF0 438 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 Q6ZSR3 168 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SLC25A26Q70HW3 274 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 KRT74Q7RTS7 529 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SLC36A1Q7Z2H8 476 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 FAM220AQ7Z4H9 259 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 VMO1Q7Z5L0 202 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SATL1Q86VE3 508 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ZNF573Q86YE8 665 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 EGFL6Q8IUX8 553 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 DHRSXQ8N5I4 330 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 TEX29Q8N6K0 151 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 Q8N7P7 452 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ZNF676Q8N7Q3 588 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 POC1AQ8NBT0 407 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 LY6G5BQ8NDX9 201 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ZNF555Q8NEP9 628 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 TMEM185AQ8NFB2 350 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 OR51A4Q8NGJ6 313 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 OR13C3Q8NGS6 347 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 OR10Z1Q8NGY1 313 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 APH1BQ8WW43 257 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SLAMF9Q96A28 289 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 UPRTQ96BW1 309 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 C1orf147Q96MC9 270 aaPredicted RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 Q96MT0 163 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 WDFY2Q96P53 400 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 NKX3-1Q99801 234 aaPredicted RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 PDCD1LG2Q9BQ51 273 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 NRIP2Q9BQI9 281 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ZNF649Q9BS31 505 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SIRPDQ9H106 197 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ABCB9Q9NP78 766 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SIRT7Q9NRC8 400 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SMPD3Q9NY59 655 aaPredicted RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 MTCH1Q9NZJ7 389 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 NLKQ9UBE8 527 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 IL36RNQ9UBH0 155 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 KAAG1Q9UBP8 84 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SLC25A10Q9UBX3 287 aaPredicted RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 CLEC2DQ9UHP7 191 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 SLC7A11Q9UPY5 501 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 MAB21L2Q9Y586 359 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 PKD1L1Q8TDX9 2849 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 TRBV2A0A0J9YWF9 115 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 A0A0U1RQK1 487 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 A0A1W2PQ09 198 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ERICH4A6NGS2 130 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 FAM90A20PA6NIJ5 464 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 NKX6-3A6NJ46 265 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 RNASEK-C17orf49H0YIS7 233 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 TRIM77I1YAP6 450 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 SIGLEC5O15389 551 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 SPRY1O43609 319 aaPredicted RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 ANGPTL7O43827 346 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 XPNPEP2O43895 674 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 FADS2O95864 444 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 ECDO95905 644 aaPredicted RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 SERPINA3P01011 423 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 IGHV4-59P01825 116 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 LIPFP07098 398 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 UBCP0CG48 685 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 LIMS3P0CW19 117 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 LIMS4P0CW20 117 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 PGA5P0DJD9 388 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ATF1P18846 271 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 BCL3P20749 454 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 CCL1P22362 96 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 PRTN3P24158 256 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 SOX2P48431 317 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 FUT6P51993 359 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 GBX2P52951 348 aaPredicted RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 ACTC1P68032 377 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ACTA1P68133 377 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms