RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 GTF3C1Q12789 2109 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 LYZL6O75951 148 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 SOX8P57073 446 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 PLP2Q04941 152 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 RNPS1Q15287 305 aaKnown RBP12.41□□□□□ -0.42
DDX41-208ENST00000507955 MEX3BQ6ZN04 569 aaKnown RBP12.41□□□□□ -0.42
DDX41-208ENST00000507955 SPAG16Q8N0X2 631 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 RDH5Q92781 318 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 PARP12Q9H0J9 701 aaKnown RBP12.41□□□□□ -0.42
DDX41-208ENST00000507955 FBXL17Q9UF56 701 aa12.41□□□□□ -0.42
DDX41-208ENST00000507955 NUDT19A8MXV4 375 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 FAM157AC9JC47 383 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 RNASEK-C17orf49H0YIS7 233 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 SNAPINO95295 136 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 SFTA3P0C7M3 94 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 RPL12P30050 165 aaKnown RBP12.4□□□□□ -0.42
DDX41-208ENST00000507955 ALKBH6Q3KRA9 238 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 KIAA2026Q5HYC2 2103 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 BTNL8Q6UX41 500 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 SUMF1Q8NBK3 374 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 OR52M1Q8NGK5 317 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 RXFP4Q8TDU9 374 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.42
DDX41-208ENST00000507955 AMDHD2Q9Y303 409 aa12.4□□□□□ -0.42
DDX41-208ENST00000507955 CRYBA1P05813 215 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 FTH1P19P0C7X4 201 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 APLNRP35414 380 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 RAB13P51153 203 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 AKR1D1P51857 326 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 TMEM187Q14656 261 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 FBXW9Q5XUX1 488 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 OR1K1Q8NGR3 316 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 UBALD1Q8TB05 177 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 C2CD4CQ8TF44 421 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 ERGIC1Q969X5 290 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 TP53RKQ96S44 253 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 NAA60Q9H7X0 242 aa12.4□□□□□ -0.43
DDX41-208ENST00000507955 PHF1O43189 567 aaPredicted RBP12.39□□□□□ -0.43
DDX41-208ENST00000507955 OR8U9P0C7N5 309 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 PET100P0DJ07 73 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 SPP1P10451 314 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 CD80P33681 288 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 ARR3P36575 388 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 SULT1A2P50226 295 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 TNFSF10P50591 281 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 HERPUD1Q15011 391 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 ZFP82Q8N141 532 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 OR8U1Q8NH10 309 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 ZFP57Q9NU63 452 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 SLC33A1O00400 549 aaPredicted RBP12.39□□□□□ -0.43
DDX41-208ENST00000507955 SS18L1O75177 396 aaPredicted RBP12.39□□□□□ -0.43
DDX41-208ENST00000507955 DEDDO75618 318 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 PPYP01298 95 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 CD5P06127 495 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
DDX41-208ENST00000507955 BCL2L2Q92843 193 aaPredicted RBP12.39□□□□□ -0.43
DDX41-208ENST00000507955 IGKV1D-13A0A0B4J2D9 117 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 K7EPK0 472 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
DDX41-208ENST00000507955 IGKV1-13P0DP09 117 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 KCNJ3P48549 501 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 ASCL1P50553 236 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
DDX41-208ENST00000507955 TMEM33P57088 247 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 SPIN3Q5JUX0 258 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 FAM71E2Q8N5Q1 922 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 OR5P3Q8WZ94 311 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 IP6K3Q96PC2 410 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 TUBD1Q9UJT1 453 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 KCNIP3Q9Y2W7 256 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 TNFSF12O43508 249 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 GNRHRP30968 328 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 AKR1C3P42330 323 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 FGF12P61328 243 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 TMEM211Q6ICI0 200 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 Q6ZRG5 221 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 MOB3AQ96BX8 217 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 HIST1H2AAQ96QV6 131 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 TRIB1Q96RU8 372 aa12.38□□□□□ -0.43
DDX41-208ENST00000507955 IGKV1-6A0A0C4DH72 117 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 NXPH3O95157 252 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 CST4P01036 141 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 HOXA1P49639 335 aaPredicted RBP12.37□□□□□ -0.43
DDX41-208ENST00000507955 P4HA3Q7Z4N8 544 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 MSI2Q96DH6 328 aaKnown RBP12.37□□□□□ -0.43
DDX41-208ENST00000507955 PRRX2Q99811 253 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 ATPIF1Q9UII2 106 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 TAAR5O14804 337 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 AGFG2O95081 481 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 IFNA21P01568 189 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 HERV-K104P61576 105 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 MKXQ8IYA7 352 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 CNEP1R1Q8N9A8 125 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms