RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 AQP5P55064 265 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 MEF2BQ02080 365 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 FLOT2Q14254 428 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 TCAIMQ8N3R3 496 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 ZNF738Q8NE65 137 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 MAL2Q969L2 176 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 APOBEC3DQ96AK3 386 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 SERPINB11Q96P15 392 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 TAPBPLQ9BX59 468 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 CHMP5Q9NZZ3 219 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 NAGKQ9UJ70 344 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 POMPQ9Y244 141 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 CARHSP1Q9Y2V2 147 aaKnown RBP1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 POLR3AO14802 1390 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 KIAA1671Q9BY89 1806 aa1.94□□□□□ -2.1
HMGB1P28-201ENST00000507778 ABCB11O95342 1321 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 ATRNO75882 1429 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 SVILO95425 2214 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 IGHV1-45A0A0A0MS14 117 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 TRAV8-2A0A0B4J237 113 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 K7ERQ8 282 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 AQP9O43315 295 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 POP7O75817 140 aaKnown RBP1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 GPR75O95800 540 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 CGB3P0DN86 165 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 CGB7P0DN87 165 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 GABRA1P14867 456 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 SPNP16150 400 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 ZNF708P17019 499 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 PYCR1P32322 319 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 TPBGQ13641 420 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 CASP8Q14790 479 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 USF2Q15853 346 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 HCP5Q6MZN7 132 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 CYHR1Q6ZMK1 362 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 DGAT2L6Q6ZPD8 337 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 CLEC20AQ6ZU45 233 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 COPS6Q7L5N1 327 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 OLIG3Q7RTU3 272 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 LYZL2Q7Z4W2 148 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 SLC25A45Q8N413 288 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 ZIC4Q8N9L1 334 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 GATD1Q8NB37 220 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 LY6G5BQ8NDX9 201 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 FAM45AQ8TCE6 357 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 PGLYRP3Q96LB9 341 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 TAS2R13Q9NYV9 303 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 ENPP5Q9UJA9 477 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 ZNF443Q9Y2A4 671 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 SNX24Q9Y343 169 aa1.93□□□□□ -2.1
HMGB1P28-201ENST00000507778 H3BMM0 161 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 SGCEO43556 437 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 SNAP29O95721 258 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 ZNF3P17036 446 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 LGALS3P17931 250 aaKnown RBP1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 RHOAP61586 193 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 DHRS2Q13268 280 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 TMED1Q13445 227 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 OR4D1Q15615 310 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 BCL2A1Q16548 175 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 TMEM25Q86YD3 366 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 UBE2WQ96B02 151 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 CLDN23Q96B33 292 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 SLC25A44Q96H78 314 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 TRIB3Q96RU7 358 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 FAAP24Q9BTP7 215 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 BTRCQ9Y297 605 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 FADS3Q9Y5Q0 445 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
HMGB1P28-201ENST00000507778 TRIP11Q15643 1979 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 A6NED7 52 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 OR5H14A6NHG9 310 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 SLC31A1O15431 190 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 NQO2P16083 231 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 UGT2B10P36537 528 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 SPAM1P38567 509 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 ZCWPW2Q504Y3 356 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 FAM162BQ5T6X4 162 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 ELP2Q6IA86 826 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 LAIR2Q6ISS4 152 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 FER1L6-AS1Q8NA97 138 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 MUC7Q8TAX7 377 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 DTD1Q8TEA8 209 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 CMBLQ96DG6 245 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 MRAP2Q96G30 205 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 REEP6Q96HR9 211 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 CYTH2Q99418 400 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 TREM1Q9NP99 234 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 U3KQK5 164 aa1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 USP42Q9H9J4 1324 aaKnown RBP1.91□□□□□ -2.1
HMGB1P28-201ENST00000507778 NACADO15069 1562 aa1.9□□□□□ -2.1
HMGB1P28-201ENST00000507778 BAZ2AQ9UIF9 1905 aaKnown RBP1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 A0A1B0GX12 115 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 TMEM250H0YL14 139 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 SULT1C2O00338 296 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 PSCAO43653 123 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 TNFAIP8O95379 198 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 GUSBP08236 651 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 SLC35E2BP0CK96 405 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms