RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
YIPF3-213ENST00000506469 KRTAP1-3Q8IUG1 177 aa11.89□□□□□ -0.51
YIPF3-213ENST00000506469 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
YIPF3-213ENST00000506469 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
YIPF3-213ENST00000506469 NUDCD2Q8WVJ2 157 aa11.89□□□□□ -0.51
YIPF3-213ENST00000506469 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
YIPF3-213ENST00000506469 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
YIPF3-213ENST00000506469 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 CA11O75493 328 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 CSN2P05814 226 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 INHBBP09529 407 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 CD3GP09693 182 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 NDUFB7P17568 137 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 PTBP1P26599 531 aaKnown RBP eCLIP11.88□□□□□ -0.51
YIPF3-213ENST00000506469 PRSS3P35030 304 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 SEC61A1P61619 476 aaKnown RBP11.88□□□□□ -0.51
YIPF3-213ENST00000506469 MRPS15P82914 257 aaKnown RBP11.88□□□□□ -0.51
YIPF3-213ENST00000506469 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 AESQ08117 197 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 PYDC2Q56P42 97 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
YIPF3-213ENST00000506469 KRBOX4Q5JUW0 171 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 RSBN1Q5VWQ0 802 aaPredicted RBP11.88□□□□□ -0.51
YIPF3-213ENST00000506469 COQ2Q96H96 371 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 FOXC2Q99958 501 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
YIPF3-213ENST00000506469 MEIOCA2RUB1 952 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 CTDSPLO15194 276 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 SSX5O60225 188 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 GLIPR1P48060 266 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 EDDM3BP56851 147 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 LMO4P61968 165 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 SLC35E4Q6ICL7 350 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 GDPD3Q7L5L3 318 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 TRAPPC6BQ86SZ2 158 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 TPRX1Q8N7U7 411 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 SRRQ9GZT4 340 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 CHMP1AQ9HD42 196 aaPredicted RBP11.87□□□□□ -0.51
YIPF3-213ENST00000506469 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
YIPF3-213ENST00000506469 TMEM30CPA0ZSE6 113 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 MT-ND4P03905 459 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 ERP29P30040 261 aaKnown RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 P2RX3P56373 397 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 GNB2P62879 340 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 DGCR2P98153 550 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 PAX5Q02548 391 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 ZNF846Q147U1 533 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 WDR25Q64LD2 544 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 GAPTQ8N292 157 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 OR4K15Q8NH41 348 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 RAB39BQ96DA2 213 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 Q96MF0 132 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 WDR12Q9GZL7 423 aaKnown RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 SCPEP1Q9HB40 452 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 KIF25Q9UIL4 384 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 TACC2O95359 2948 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 APCP25054 2843 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 MEIKINA0A087WXM9 373 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 TRAV39A0A0B4J263 110 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 MEIS3P1A6NDR6 274 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 GABARAPH6UMI1 98 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 H7C1Q1 480 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 SULT1C2O00338 296 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 NAPSAO96009 420 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 LPLP06858 475 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 IL2RGP31785 369 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 NPY4RP50391 375 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 MRPS10P82664 201 aaKnown RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 ESCO2Q56NI9 601 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 SETD6Q8TBK2 473 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 CCDC107Q8WV48 283 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 SMIM4Q8WVI0 70 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 FCAMRQ8WWV6 532 aa11.86□□□□□ -0.51
YIPF3-213ENST00000506469 SSBP3Q9BWW4 388 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 ZNF230Q9UIE0 474 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-213ENST00000506469 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 A0A096LNT2 108 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 ODAMA1E959 279 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 GPR37O15354 613 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 PHF1O43189 567 aaPredicted RBP11.85□□□□□ -0.51
YIPF3-213ENST00000506469 GSTZ1O43708 216 aaPredicted RBP11.85□□□□□ -0.51
YIPF3-213ENST00000506469 FCGR3AP08637 254 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 PPP5CP53041 499 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 Q6ZPA2 131 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 Q8N402 240 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 GVQW1Q8N7I0 195 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 GDPD1Q8N9F7 314 aa11.85□□□□□ -0.51
YIPF3-213ENST00000506469 MAFIPQ8WZ33 124 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms