RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 SHOXO15266 292 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 MPPED1O15442 326 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 ACAA1P09110 424 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF44P15621 663 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 GNRHRP30968 328 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 S100A10P60903 97 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SMCO1Q147U7 214 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 ALKBH6Q3KRA9 238 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 PAN3Q58A45 887 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 Q6P435 159 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF880Q6PDB4 577 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 CCDC28AQ8IWP9 274 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 C1orf174Q8IYL3 243 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF565Q8N9K5 539 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SNIP1Q8TAD8 396 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 GLYATL2Q8WU03 294 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 MSI2Q96DH6 328 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 C18orf12Q96KH6 178 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SHARPINQ9H0F6 387 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 FBXO9Q9UK97 447 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 H7C1Q1 480 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 TUSC2O75896 110 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 CRYABP02511 175 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 PGA5P0DJD9 388 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SPINK2P20155 84 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 MDH2P40926 338 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 KCNJ3P48549 501 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF154Q13106 437 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 IGFBP7Q16270 282 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 FAM169BQ8N8A8 192 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 OR8G5Q8NG78 346 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 OR11L1Q8NGX0 322 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 DMRTA2Q96SC8 542 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SLX1AQ9BQ83 275 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 NRIP2Q9BQI9 281 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 OPN3Q9H1Y3 402 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 PCDHB10Q9UN67 800 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SESN1Q9Y6P5 492 aa13.12□□□□□ -0.31
SNCAIP-207ENST00000504884 SHANK1Q9Y566 2161 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 C3orf85A0A1B0GTC6 90 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 CDIPTO14735 213 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 MPV17P39210 176 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 RND3P61587 244 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 SRPXP78539 464 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 HERPUD1Q15011 391 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 EIF2S3LQ2VIR3 472 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 BHLHA15Q7RTS1 189 aaPredicted RBP13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 OR4A4PQ8NGN8 299 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 ZFP57Q9NU63 452 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 PURGQ9UJV8 347 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 AMDHD2Q9Y303 409 aa13.11□□□□□ -0.31
SNCAIP-207ENST00000504884 MSGN1A6NI15 193 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 OR5H1A6NKK0 313 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 GPR31O00270 319 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 TAAR5O14804 337 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 DEDDO75618 318 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 GRPP07492 148 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 CECR9P0C854 216 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF250P15622 560 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF146Q15072 292 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 SHEQ5VZ18 495 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 C20orf204Q6ZNR8 217 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 BAP18Q8IXM2 172 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 RBMXL3Q8N7X1 1067 aaKnown RBP13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 SECTM1Q8WVN6 248 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 DNTTIP1Q9H147 329 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 CYTL1Q9NRR1 136 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF292O60281 2723 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 IGKV1-6A0A0C4DH72 117 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 SH2D1BO14796 132 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 NXPH2O95156 264 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 KITLGP21583 273 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 ESPL1Q14674 2120 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 PCSK4Q6UW60 755 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 HSD17B13Q7Z5P4 300 aaPredicted RBP13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 C5orf24Q7Z6I8 188 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 FOXRED2Q8IWF2 684 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 EIF4E3Q8N5X7 224 aaKnown RBP13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 LRRC20Q8TCA0 184 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 SLC5A7Q9GZV3 580 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 LOC400499M0QZD8 3231 aa13.1□□□□□ -0.31
SNCAIP-207ENST00000504884 DMXL1Q9Y485 3027 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 H0YL77 283 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 OR2H2O95918 312 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 HKR1P10072 659 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 GLI4P10075 376 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms