RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 CCDC3Q9BQI4 270 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 SULT4A1Q9BR01 284 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PBDC1Q9BVG4 233 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CHST6Q9GZX3 395 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 LAT2Q9GZY6 243 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ZBP1Q9H171 429 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 SRMSQ9H3Y6 488 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RGCCQ9H4X1 137 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ZNF665Q9H7R5 613 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 FKRPQ9H9S5 495 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RHOFQ9HBH0 211 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RAB18Q9NP72 206 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 NIT2Q9NQR4 276 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PARP11Q9NR21 331 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 FLRT3Q9NZU0 649 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 DEC1Q9P2X7 70 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 METTL1Q9UBP6 276 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 PRODH2Q9UF12 536 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 HHLA2Q9UM44 414 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CCL26Q9Y258 94 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 TRIP12Q14669 1992 aaPredicted RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 TRAV8-7A0A075B6U6 113 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 BORCS7-ASMTA0A0B4J1R7 106 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 IGLON5A6NGN9 336 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 COLCA2A8K830 154 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 NPIPB9F8W1W9 429 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 MBTPS2O43462 519 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 TGOLN2O43493 480 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 FGF17O60258 216 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 EIF1BO60739 113 aaKnown RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 SFT2D2O95562 160 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ACTL6AO96019 429 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 CST4P01036 141 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 GAPDHP04406 335 aaKnown RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 CSN2P05814 226 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 GLAP06280 429 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 NGFRP08138 427 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ACAA1P09110 424 aaPredicted RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 LINC00271P0C7V0 271 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SMIM10L1P0DMW3 83 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 PRF1P14222 555 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ADCYAP1P18509 176 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 RCC1P18754 421 aaPredicted RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 CSRP1P21291 193 aaKnown RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 CA6P23280 308 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 CD1CP29017 333 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 S100A2P29034 98 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 AQP2P41181 271 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 EIF1P41567 113 aaKnown RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 CDKN2AP42771 156 aaKnown RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 EMDP50402 254 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 EFNB2P52799 333 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 AKR1C2P52895 323 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 HERV-K104P61576 105 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 RPS21P63220 83 aaKnown RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 DEFA6Q01524 100 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 AKR1C1Q04828 323 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SLC17A1Q14916 467 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ARL6IP1Q15041 203 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 MLF2Q15773 248 aaPredicted RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 BEX5Q5H9J7 111 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 WDR38Q5JTN6 314 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 DNLZQ5SXM8 178 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 UNQ6126/PRO20091Q6UXV3 157 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.52□□□□□ -1.85
RFC1-208ENST00000504849 ZNF600Q6ZNG1 722 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 VN1R4Q7Z5H5 301 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 DEFB128Q7Z7B8 93 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 FJX1Q86VR8 437 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OOSP2Q86WS3 158 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 TMEM219Q86XT9 240 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 KMT5CQ86Y97 462 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OR4N5Q8IXE1 308 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ZFP82Q8N141 532 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ARRDC1Q8N5I2 433 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 JAGN1Q8N5M9 183 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 CHST4Q8NCG5 386 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 LFNGQ8NES3 379 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OR13C3Q8NGS6 347 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OR13C8Q8NGS7 320 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OR10R2Q8NGX6 335 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OTOSQ8NHW6 89 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 ZNF563Q8TA94 476 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 TMED6Q8WW62 240 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 AQP3Q92482 292 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SMARCD2Q92925 531 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 TM4SF19Q96DZ7 209 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 MALSU1Q96EH3 234 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SLC25A44Q96H78 314 aaPredicted RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 SMIM10Q96HG1 83 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SEC22AQ96IW7 307 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SMIM8Q96KF7 97 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 AQP10Q96PS8 301 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 OR2M4Q96R27 311 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 SLC6A7Q99884 636 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 NUDT9Q9BW91 350 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 MAGT1Q9H0U3 335 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 TLNRD1Q9H1K6 362 aa3.52□□□□□ -1.85
RFC1-208ENST00000504849 C6orf106Q9H6K1 298 aaPredicted RBP3.52□□□□□ -1.85
RFC1-208ENST00000504849 ELOVL3Q9HB03 270 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms