RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 OR13C8Q8NGS7 320 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 RDH5Q92781 318 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 SDSLQ96GA7 329 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 GAFA1Q96PS6 74 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 SLC6A7Q99884 636 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 CMSS1Q9BQ75 279 aaKnown RBP8.68□□□□□ -1.02
TPM3-217ENST00000504663 CHST6Q9GZX3 395 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 LIME1Q9H400 295 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 SPACA1Q9HBV2 294 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 C12orf4Q9NQ89 552 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 TMEM106BQ9NUM4 274 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 SLC2A8Q9NY64 477 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 PPP1R3CQ9UQK1 317 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 MAB21L2Q9Y586 359 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 NPTNQ9Y639 398 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 IGKV1-6A0A0C4DH72 117 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 OR2AT4A6NND4 320 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 VSTM5A8MXK1 200 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 OVOL3O00110 214 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 DEGS1O15121 323 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 ZNF205O95201 554 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 CSN2P05814 226 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 AKAIN1P0CW23 69 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 ZNF44P15621 663 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 TNFRSF1AP19438 455 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 COL8A2P25067 703 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 HRH1P35367 487 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 CBX5P45973 191 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 ARFRP1Q13795 201 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 HERPUD1Q15011 391 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
TPM3-217ENST00000504663 TRIM16LQ309B1 348 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 ZNF788Q6ZQV5 615 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 TCF23Q7RTU1 214 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 LHFPL1Q86WI0 220 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 FGFRL1Q8N441 504 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 BEST4Q8NFU0 473 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 OR56B4Q8NH76 319 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 CACNG6Q9BXT2 260 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 HELZ2Q9BYK8 2649 aaKnown RBP8.67□□□□□ -1.02
TPM3-217ENST00000504663 PPA2Q9H2U2 334 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 TMEM165Q9HC07 324 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 Q9N2K0 584 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 ETAA1Q9NY74 926 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 TAS2R8Q9NYW2 309 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 OR14J1Q9UGF5 321 aa8.67□□□□□ -1.02
TPM3-217ENST00000504663 IGHV1-69-2A0A0G2JMI3 117 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 NAP1L6A6NFF2 107 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 ZNF736B4DX44 427 aaPredicted RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 LYNX1G3V0Z9 82 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 LGALS8O00214 317 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 SH2D1BO14796 132 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 LY6HO94772 140 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 RAB3DO95716 219 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 GSTT2BP0CG30 244 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 LYNX1P0DP58 116 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 TBPP20226 339 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 GIFP27352 417 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 PRDX2P32119 198 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 MDH2P40926 338 aaKnown RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 MECP2P51608 486 aaKnown RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 AP3S2P59780 193 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 ATXN7L3Q14CW9 347 aaPredicted RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 ZMYND11Q15326 602 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 PAN3Q58A45 887 aaKnown RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 ATPAF1Q5TC12 328 aaPredicted RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 AGAP6Q5VW22 663 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 OVCH2Q7RTZ1 564 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 BOLLQ8N9W6 283 aaKnown RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 OR11L1Q8NGX0 322 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 NINJ1Q92982 152 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 MARVELD1Q9BSK0 173 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 EGLN1Q9GZT9 426 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 UBTD1Q9HAC8 227 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 IFT46Q9NQC8 304 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 MBNL3Q9NUK0 354 aaKnown RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 ZNF701Q9NV72 531 aaPredicted RBP8.66□□□□□ -1.02
TPM3-217ENST00000504663 CTSZQ9UBR2 303 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 ANXA10Q9UJ72 324 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 ZNF221Q9UK13 617 aa8.66□□□□□ -1.02
TPM3-217ENST00000504663 A1L4Q6 167 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 CEACAM18A8MTB9 384 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 MCRIP1C9JLW8 97 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 J3QKU1 62 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 SIGLEC5O15389 551 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 NDUFS7O75251 213 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 FSTL3O95633 263 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 IGHV2-70P01814 119 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 PMP2P02689 132 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 TCRBP04435 133 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 GSTT2P0CG29 244 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 MUC1P15941 1255 aaPredicted RBP8.65□□□□□ -1.02
TPM3-217ENST00000504663 RCC1P18754 421 aaPredicted RBP8.65□□□□□ -1.02
TPM3-217ENST00000504663 CDKN1AP38936 164 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 INPP1P49441 399 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 MRPS11P82912 194 aaKnown RBP8.65□□□□□ -1.02
TPM3-217ENST00000504663 HMGN3Q15651 99 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 C21orf62-AS1Q17RA5 79 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms