RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF728P0DKX0 622 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 ARSBP15848 533 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 BPIFB3P59826 476 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 RPS27AP62979 156 aaKnown RBP20.59■□□□□ 0.89
LSM6-202ENST00000502781 BLMHQ13867 455 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 ATXN7L3Q14CW9 347 aaPredicted RBP20.59■□□□□ 0.89
LSM6-202ENST00000502781 P2RY14Q15391 338 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 SIGIRRQ6IA17 410 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 BPIFB2Q8N4F0 458 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 CORO2AQ92828 525 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 TM2D1Q9BX74 207 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 KCNK15Q9H427 330 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 SPACA1Q9HBV2 294 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 SIRT7Q9NRC8 400 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 ZNF69Q9UC07 566 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 ODAMA1E959 279 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 HSPB6O14558 160 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 LDLRAD4O15165 306 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 RBP4P02753 201 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 RANBP1P43487 201 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 KRBOX4Q5JUW0 171 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 GPR157Q5UAW9 335 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 RSBN1Q5VWQ0 802 aaPredicted RBP20.58■□□□□ 0.88
LSM6-202ENST00000502781 OR51D1Q8NGF3 324 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 OR13F1Q8NGS4 319 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 PLPPR1Q8TBJ4 325 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 FAM3DQ96BQ1 224 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 TMEM59Q9BXS4 323 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 MRPS26Q9BYN8 205 aaKnown RBP20.58■□□□□ 0.88
LSM6-202ENST00000502781 RNF167Q9H6Y7 350 aa20.58■□□□□ 0.88
LSM6-202ENST00000502781 IGHV3OR16-10A0A075B7F0 116 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 LOC100506127A0A0U1RQW1 187 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 AIPO00170 330 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 CLDN12P56749 244 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 HES5Q5TA89 166 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 LHX4Q969G2 390 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 ZNF714Q96N38 554 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 BARHL1Q9BZE3 327 aa20.57■□□□□ 0.88
LSM6-202ENST00000502781 UBE2J1Q9Y385 318 aaPredicted RBP20.57■□□□□ 0.88
LSM6-202ENST00000502781 MEX3AA1L020 520 aaKnown RBP20.56■□□□□ 0.88
LSM6-202ENST00000502781 RNASEK-C17orf49H0YIS7 233 aa20.56■□□□□ 0.88
LSM6-202ENST00000502781 IFNA2P01563 188 aa20.56■□□□□ 0.88
LSM6-202ENST00000502781 GLAP06280 429 aa20.56■□□□□ 0.88
LSM6-202ENST00000502781 SDC2P34741 201 aa20.56■□□□□ 0.88
LSM6-202ENST00000502781 DLX1P56177 255 aa20.56■□□□□ 0.88
LSM6-202ENST00000502781 ATAD3CQ5T2N8 411 aa20.56■□□□□ 0.88
LSM6-202ENST00000502781 IGHV1-69DA0A0B4J2H0 117 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 hCG_1809904A0A1W2PP81 198 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 A0A1W2PPE2 198 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 A0A1W2PR64 198 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 A0A1W2PRV1 198 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 NOTOA8MTQ0 251 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 H3BUI4 141 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 AIREO43918 545 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 IGHV1-69P01742 117 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 FUT3P21217 361 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 FPR2P25090 351 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 C2orf76Q3KRA6 126 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 NCR3LG1Q68D85 454 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 HCP5Q6MZN7 132 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 FAM89BQ8N5H3 189 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 LPAR5Q9H1C0 372 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 TAS2R3Q9NYW6 316 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 KIF25Q9UIL4 384 aa20.55■□□□□ 0.88
LSM6-202ENST00000502781 CUBNO60494 3623 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 TRGV10A0A0A0MS01 117 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 TFAP2AP05549 437 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 CGB3P0DN86 165 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 CGB7P0DN87 165 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 ERVFRD-1P60508 538 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 SLC35E4Q6ICL7 350 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 RAB12Q6IQ22 244 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 BRD3OSQ6XYD6 125 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 BCL6BQ8N143 479 aaPredicted RBP20.54■□□□□ 0.88
LSM6-202ENST00000502781 C22orf15Q8WYQ4 148 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 NICN1Q9BSH3 213 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 FUNDC2Q9BWH2 189 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 MS4A7Q9GZW8 240 aaPredicted RBP20.54■□□□□ 0.88
LSM6-202ENST00000502781 OR6C3Q9NZP0 311 aa20.54■□□□□ 0.88
LSM6-202ENST00000502781 PDCD6O75340 191 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 ALDH3B2P48448 385 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 GUCA2AQ02747 115 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 PRB3Q04118 309 aaPredicted RBP20.53■□□□□ 0.88
LSM6-202ENST00000502781 RBM39Q14498 530 aaKnown RBP20.53■□□□□ 0.88
LSM6-202ENST00000502781 BRICD5Q6PL45 260 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 GAPTQ8N292 157 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 SLC6A7Q99884 636 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 ING3Q9NXR8 418 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 PEX16Q9Y5Y5 336 aa20.53■□□□□ 0.88
LSM6-202ENST00000502781 A0A0A6YYD4 124 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 TMEM272A0A1B0GTI8 110 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 SMIM30A4D0T7 59 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 MCRIP1C9JLW8 97 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 CLEC2LP0C7M8 214 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 IGHV1-8P0DP01 117 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 CHATP28329 748 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 UBE2E1P51965 193 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 KLRD1Q13241 179 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 RUSC1-AS1Q66K80 236 aa20.52■□□□□ 0.88
LSM6-202ENST00000502781 USP43Q70EL4 1123 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms