RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ANKHQ9HCJ1 492 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 SLC22A14Q9Y267 594 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 KIF27Q86VH2 1401 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 NRCAMQ92823 1304 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 FLG2Q5D862 2391 aaPredicted RBP0.88□□□□□ -2.27
SMC4-227ENST00000497984 AQRO60306 1485 aaKnown RBP eCLIP0.87□□□□□ -2.272e-51■■■■■ 196.9
SMC4-227ENST00000497984 OR5H14A6NHG9 310 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 H3BP45 60 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 M0QXV9 152 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 RFXANKO14593 260 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 PRMT5O14744 637 aaPredicted RBP0.87□□□□□ -2.27
SMC4-227ENST00000497984 LECT2O14960 151 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 SH2D1AO60880 128 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 PSKH1P11801 424 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 IL12BP29460 328 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 ARR3P36575 388 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 XKP51811 444 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 PLTPP55058 493 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 N4BP2L1Q5TBK1 243 aaPredicted RBP0.87□□□□□ -2.27
SMC4-227ENST00000497984 NIT1Q86X76 327 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 OR51Q1Q8NH59 317 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 ZNF396Q96N95 335 aaPredicted RBP0.87□□□□□ -2.27
SMC4-227ENST00000497984 VAT1Q99536 393 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 BCL7BQ9BQE9 202 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 SLC25A31Q9H0C2 315 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 GAL3ST2Q9H3Q3 398 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 TDRD3Q9H7E2 651 aaKnown RBP0.87□□□□□ -2.27
SMC4-227ENST00000497984 SDHAF2Q9NX18 166 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 DNAJC27Q9NZQ0 273 aa0.87□□□□□ -2.27
SMC4-227ENST00000497984 CHTOPQ9Y3Y2 248 aaKnown RBP0.87□□□□□ -2.27
SMC4-227ENST00000497984 NUP205Q92621 2012 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 POLR3AO14802 1390 aaPredicted RBP0.86□□□□□ -2.27
SMC4-227ENST00000497984 STRCP1A6NGW2 1772 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 IGHV1-45A0A0A0MS14 117 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 TRAV8-3A0A0A6YYJ7 113 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 PGPA6NDG6 321 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 F5H5T6 163 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 ENSAO43768 121 aaKnown RBP0.86□□□□□ -2.27
SMC4-227ENST00000497984 POP7O75817 140 aaKnown RBP0.86□□□□□ -2.27
SMC4-227ENST00000497984 SOX14O95416 240 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 RAB36O95755 333 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 CPN2P22792 545 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 EVI2BP34910 448 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 NKAIN1Q4KMZ8 207 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 ZCWPW2Q504Y3 356 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 ACTL10Q5JWF8 245 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 C10orf91Q5T1B1 145 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 ELP2Q6IA86 826 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 ZIC4Q8N9L1 334 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 FAM184AQ8NB25 1140 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 DRAXINQ8NBI3 349 aaPredicted RBP0.86□□□□□ -2.27
SMC4-227ENST00000497984 OR11G2Q8NGC1 345 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 OR6N2Q8NGY6 317 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 OR4A5Q8NH83 315 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 CMBLQ96DG6 245 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 CPB2Q96IY4 423 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 BIRC8Q96P09 236 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 AICDAQ9GZX7 198 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 STMN3Q9NZ72 180 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 SLC23A2Q9UGH3 650 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 LINC00588Q9Y4M8 146 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 URGCP-MRPS24S4R325 110 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 ATRNO75882 1429 aa0.86□□□□□ -2.27
SMC4-227ENST00000497984 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 ERICH4A6NGS2 130 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 PLPP3O14495 311 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 TCF21O43680 179 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 SC5DO75845 299 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 CA2P00918 260 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 ANGP03950 147 aaKnown RBP0.85□□□□□ -2.27
SMC4-227ENST00000497984 GUSBP08236 651 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 STAG3L2P0CL84 134 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 GCLMP48507 274 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 STX4Q12846 297 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 C6orf183Q5T699 404 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 NXNL2Q5VZ03 156 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 RESP18Q5W5W9 173 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 NIPAL1Q6NVV3 410 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 OR4C16Q8NGL9 310 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 OR5C1Q8NGR4 320 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 MFSD8Q8NHS3 518 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 GPR119Q8TDV5 335 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 DOK4Q8TEW6 326 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 REEP6Q96HR9 211 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 TM6SF2Q9BZW4 377 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 ARL6Q9H0F7 186 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 SYT4Q9H2B2 425 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 VAPAQ9P0L0 249 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 RPUSD1Q9UJJ7 312 aaKnown RBP0.85□□□□□ -2.27
SMC4-227ENST00000497984 PHLDA3Q9Y5J5 127 aa0.85□□□□□ -2.27
SMC4-227ENST00000497984 ADAMTS7Q9UKP4 1686 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 RP1L1Q8IWN7 2480 aaPredicted RBP0.84□□□□□ -2.27
SMC4-227ENST00000497984 DOCK10Q96BY6 2186 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 IGHV2-26A0A0B4J1V2 119 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 A0A1W2PQL4 384 aaPredicted RBP0.84□□□□□ -2.27
SMC4-227ENST00000497984 IGKV2-29A2NJV5 120 aaPredicted RBP0.84□□□□□ -2.27
SMC4-227ENST00000497984 ZNF860A6NHJ4 632 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 ODF3BA8MYP8 253 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 KLRC4-KLRK1H3BQV0 150 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 VAPBO95292 243 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms