RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 BEX1Q9HBH7 125 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 C1RLQ9NZP8 487 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 ZNRD1Q9P1U0 126 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 ANK2Q01484 3957 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 SHISA3A0PJX4 238 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 ZNF737O75373 536 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 NDUFA7O95182 113 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 HTR3BO95264 441 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 CSTBP04080 98 aaKnown RBP12.51□□□□□ -0.41
NUP50-219ENST00000497960 CALCBP10092 127 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 CCL3L1P16619 93 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 RAB3BP20337 219 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 GABRR1P24046 479 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 MTNR1BP49286 362 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 BMXP51813 675 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 LSM3P62310 102 aaKnown RBP12.51□□□□□ -0.41
NUP50-219ENST00000497960 ZNF273Q14593 569 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 SLC22A6Q4U2R8 563 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 HCP5Q6MZN7 132 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 OR8H2Q8N162 312 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 OR6M1Q8NGM8 313 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 OR5R1Q8NH85 324 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 PPP1R35Q8TAP8 253 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 RNF167Q9H6Y7 350 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 RHOFQ9HBH0 211 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
NUP50-219ENST00000497960 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 SMIM30A4D0T7 59 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 COX7A1P24310 79 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 HTR2CP28335 458 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 DUSP1P28562 367 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 RPL5P46777 297 aaKnown RBP12.5□□□□□ -0.41
NUP50-219ENST00000497960 LGALS4P56470 323 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 OR10A3P58181 314 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
NUP50-219ENST00000497960 EDDM3AQ14507 147 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 ZNF146Q15072 292 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 GRK1Q15835 563 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 RAB11BQ15907 218 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 C11orf42Q8N5U0 333 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 GFI1Q99684 422 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 HMG20AQ9NP66 347 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 PCDHB16Q9NRJ7 776 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 V9GY05 133 aa12.5□□□□□ -0.41
NUP50-219ENST00000497960 hADV38S2A0JD32 116 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 SLC17A2O00624 439 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 SH2D1BO14796 132 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 ZNF780AO75290 641 aaPredicted RBP12.49□□□□□ -0.41
NUP50-219ENST00000497960 UBBP0CG47 229 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 ZNF728P0DKX0 622 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 PSMD7P51665 324 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 RELBQ01201 579 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 MXD1Q05195 221 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 GPR176Q14439 515 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 TAF9Q16594 264 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 C1orf100Q5SVJ3 147 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 HES5Q5TA89 166 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 OLFML2AQ68BL7 652 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
NUP50-219ENST00000497960 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
NUP50-219ENST00000497960 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 OSR2Q8N2R0 312 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 BEND2Q8NDZ0 799 aa12.49□□□□□ -0.41
NUP50-219ENST00000497960 A0A1W2PP11 408 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 CLPSL1A2RUU4 121 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 MGST3O14880 152 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 SLC22A1O15245 554 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 NOL3O60936 208 aaKnown RBP12.48□□□□□ -0.41
NUP50-219ENST00000497960 CRTAPO75718 401 aaPredicted RBP12.48□□□□□ -0.41
NUP50-219ENST00000497960 GABARAPO95166 117 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 RBP4P02753 201 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 ZNF44P15621 663 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 SDC2P34741 201 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 TGFBR1P36897 503 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 RANBP1P43487 201 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 DLX6P56179 175 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 P2RY14Q15391 338 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 PIGYQ3MUY2 71 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 ELP2Q6IA86 826 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 ASCL4Q6XD76 172 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 OR13D1Q8NGV5 346 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 ZNF714Q96N38 554 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 CHST6Q9GZX3 395 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
NUP50-219ENST00000497960 CST11Q9H112 138 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 KCNK15Q9H427 330 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 GHRLQ9UBU3 117 aa12.48□□□□□ -0.41
NUP50-219ENST00000497960 STEAP1Q9UHE8 339 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms