RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TNRC18O15417 2968 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-224ENST00000497488 LAMA4Q16363 1823 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 IGHV3OR16-10A0A075B7F0 116 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 MYL12BO14950 172 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 NPIPB7O75200 414 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 TGFBR2P37173 567 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 MAGEA12P43365 314 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 NOVP48745 357 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 RPL34P49207 117 aaKnown RBP4.54□□□□□ -1.68
BRCA1-224ENST00000497488 SNAP25P60880 206 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 PPP1R1AQ13522 171 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 SLC9A3R2Q15599 337 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 GUCA2BQ16661 112 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 TMEM236Q5W0B7 351 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 FAM131AQ6UXB0 335 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 PAMR1Q6UXH9 720 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 FBXW12Q6X9E4 464 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 TBC1D19Q8N5T2 526 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 PXT1Q8NFP0 134 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 OR1S1Q8NH92 325 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 NEK7Q8TDX7 302 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 ASB13Q8WXK3 278 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 NTAN1Q96AB6 310 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 CLDN23Q96B33 292 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 FBXO17Q96EF6 278 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 CEP19Q96LK0 163 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 SUCNR1Q9BXA5 334 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 OR11A1Q9GZK7 315 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 GNB4Q9HAV0 340 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 HEBP1Q9NRV9 189 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 RBFOX1Q9NWB1 397 aaKnown RBP4.54□□□□□ -1.68
BRCA1-224ENST00000497488 MARCH5Q9NX47 278 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 TMEM9Q9P0T7 183 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 TIMM22Q9Y584 194 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
BRCA1-224ENST00000497488 LRRK1Q38SD2 2015 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 RBBP6Q7Z6E9 1792 aaKnown RBP4.53□□□□□ -1.68
BRCA1-224ENST00000497488 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 IGHV1-69DA0A0B4J2H0 117 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 A0A0G2JN53 185 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 PEX7O00628 323 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 NDUFS5O43920 106 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 FOXH1O75593 365 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 REM1O75628 298 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 IGHV3-23P01764 117 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 CCL5P13501 91 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 CD99P14209 185 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 ATF1P18846 271 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 DRD3P35462 400 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 LGALS7P47929 136 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 HBG1P69891 147 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 HBG2P69892 147 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 FMODQ06828 376 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 LAMTOR4Q0VGL1 99 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 OR2F1Q13607 317 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 CLEC12AQ5QGZ9 265 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 STRADAQ7RTN6 431 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 TAC4Q86UU9 113 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 NIT1Q86X76 327 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 CCNYL1Q8N7R7 359 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 ZIM3Q96PE6 472 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 DOK1Q99704 481 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 SLC25A39Q9BZJ4 359 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-224ENST00000497488 TPK1Q9H3S4 243 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 VSIRQ9H7M9 311 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 XPNPEP1Q9NQW7 623 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 GID8Q9NWU2 228 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 NEUROG3Q9Y4Z2 214 aa4.53□□□□□ -1.68
BRCA1-224ENST00000497488 COL11A1P12107 1806 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-224ENST00000497488 MYH4Q9Y623 1939 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF236Q9UL36 1845 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 CENPVL3A0A0U1RRI6 287 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 A0A1B0GXF2 115 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 SMIM9A6NGZ8 99 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 KRTAP4-16G5E9R7 235 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-224ENST00000497488 MOSP00540 346 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 TRBV12-3P01733 135 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 SLPIP03973 132 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 TDGF1P13385 188 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 UCHL3P15374 230 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 ALOX5APP20292 161 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 SSTR5P35346 364 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 CDKN2BP42772 138 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 OR3A4PP47883 348 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 PPOXP50336 477 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 TDGF1P3P51864 188 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 PAX8Q06710 450 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 PTGES3Q15185 160 aaKnown RBP4.52□□□□□ -1.69
BRCA1-224ENST00000497488 FBXW9Q5XUX1 488 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 TNFAIP8L2Q6P589 184 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-224ENST00000497488 PLET1Q6UQ28 207 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 ZCCHC24Q8N2G6 241 aaKnown RBP4.52□□□□□ -1.69
BRCA1-224ENST00000497488 FAM172AQ8WUF8 416 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 IMP4Q96G21 291 aaKnown RBP4.52□□□□□ -1.69
BRCA1-224ENST00000497488 QKIQ96PU8 341 aaKnown RBP eCLIP4.52□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF702PQ9H963 129 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 RAB26Q9ULW5 256 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms