RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 BDKRB2P30411 391 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF93P35789 620 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-213ENST00000496347 OR3A4PP47883 348 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 ST3GAL4Q11206 333 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 HERPUD1Q15011 391 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 Q499Y3 187 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 ABHD12Q8N2K0 398 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 GHSRQ92847 366 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 PGLYRP3Q96LB9 341 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 PPIL3Q9H2H8 161 aaKnown RBP12.67□□□□□ -0.38
HDAC4-213ENST00000496347 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 CLEC2DQ9UHP7 191 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 SIRT4Q9Y6E7 314 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-213ENST00000496347 KBTBD11-OT1A0A1B0GTJ5 212 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 MEGF11A6BM72 1044 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 H3BUI4 141 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 HSPB6O14558 160 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 MYL12BO14950 172 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF780AO75290 641 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-213ENST00000496347 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 GLP1RP43220 463 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
HDAC4-213ENST00000496347 PIGYQ3MUY2 71 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 C16orf82Q7Z2V1 217 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 TMEM219Q86XT9 240 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 THRSPQ92748 146 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 GGHQ92820 318 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 NKX3-1Q99801 234 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-213ENST00000496347 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 PSORS1C1Q9UIG5 152 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
HDAC4-213ENST00000496347 FAM90A22PA8MWA6 464 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 GPX5O75715 221 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 TSPAN15O95858 294 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 IGFBP3P17936 291 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-213ENST00000496347 CEACAM3P40198 252 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC4-213ENST00000496347 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-213ENST00000496347 AHSA2Q719I0 299 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF565Q8N9K5 539 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 CFHR4Q92496 578 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-213ENST00000496347 S100A13Q99584 98 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF184Q99676 751 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-213ENST00000496347 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 METTL9Q9H1A3 318 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 PCDHB16Q9NRJ7 776 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 PLCXD1Q9NUJ7 323 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
HDAC4-213ENST00000496347 MEIKINA0A087WXM9 373 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 LEUTXA8MZ59 168 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 OOSP1A8MZH6 123 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 XPNPEP2O43895 674 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 OR7C1O76099 320 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-213ENST00000496347 CDRT1O95170 752 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 HTR3BO95264 441 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 IL1AP01583 271 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 CSTBP04080 98 aaKnown RBP12.64□□□□□ -0.39
HDAC4-213ENST00000496347 CD1AP06126 327 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 BRS3P32247 399 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 RAB13P51153 203 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 WNT4P56705 351 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 MPV17LQ2QL34 196 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-213ENST00000496347 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 BAIAP2L2Q6UXY1 529 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 OSR2Q8N2R0 312 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 STX19Q8N4C7 294 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 OR14A2Q96R54 314 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-213ENST00000496347 PRSS22Q9GZN4 317 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 ING3Q9NXR8 418 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 CALYQ9NYX4 217 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
HDAC4-213ENST00000496347 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-213ENST00000496347 TGP01266 2768 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 TRBV5-7A0A0A0MS05 114 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 MAGEA13PA6NCF6 341 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 TOR1AO14656 332 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 WIPF1O43516 503 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 CSF1P09603 554 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 SERPINA2P20848 420 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 MAPK3P27361 379 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-213ENST00000496347 C21orf33P30042 268 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-213ENST00000496347 GDNFP39905 211 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 PRRX1P54821 245 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 GPR176Q14439 515 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms