RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DUSP13Q9UII6 198 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SH3BGRL2Q9UJC5 107 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 FZR1Q9UM11 496 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 MGAT4AQ9UM21 535 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 PCDHB10Q9UN67 800 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 HEATR1Q9H583 2144 aaKnown RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 PCNX1Q96RV3 2341 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ACACBO00763 2458 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 TRBV6-7A0A0A0MS04 114 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 IGKV1-6A0A0C4DH72 117 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 KIR2DS1A0A191URI9 304 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 C17orf100A8MU93 164 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 CREBL2O60519 120 aaPredicted RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 PSPNO60542 156 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 NXPH2O95156 264 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 DUS4LO95620 317 aaKnown RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 HAND1O96004 215 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 IFNA6P05013 189 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 HEXAP06865 529 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 CTSDP07339 412 aaPredicted RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 GRPP07492 148 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 OR4A8P0C604 315 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 GSTT2P0CG29 244 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 OR5H8P0DN80 308 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 CGB3P0DN86 165 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 CGB7P0DN87 165 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 DUSP1P28562 367 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 APOBEC3AP31941 199 aaPredicted RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 KIR2DS4P43632 304 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 OR3A3P47888 321 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ZNF81P51508 661 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 TAS2R31P59538 309 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 SUPT4H1P63272 117 aaKnown RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 DHRS2Q13268 280 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 IKZF1Q13422 519 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 KIR2DS1Q14954 304 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 HMGN3Q15651 99 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 NKPD1Q17RQ9 610 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 CHRFAM7AQ494W8 412 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 BEX5Q5H9J7 111 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 PRAMEF6Q5VXH4 476 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 TEX36Q5VZQ5 186 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 C17orf107Q6ZR85 190 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ZNF826PQ6ZT77 177 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 MOB1BQ7L9L4 216 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 LYG2Q86SG7 212 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 WFDC8Q8IUA0 241 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 OR2AK2Q8NG84 335 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 OR2Z1Q8NG97 314 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ANGPTL6Q8NI99 470 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 PLPPR1Q8TBJ4 325 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 MARCH1Q8TCQ1 289 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 CAPSLQ8WWF8 208 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ITLN2Q8WWU7 325 aaPredicted RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 MOB3AQ96BX8 217 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ELMOD3Q96FG2 381 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 GALNT14Q96FL9 552 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 SDSLQ96GA7 329 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 FYTTD1Q96QD9 318 aaKnown RBP5.7□□□□□ -1.5
MSH5-217ENST00000494458 OR2V2Q96R30 315 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 SEC22CQ9BRL7 303 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 MED28Q9H204 178 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 DLL4Q9NR61 685 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 SLC23A1Q9UHI7 598 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 PLCE1Q9P212 2302 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ADGRG4Q8IZF6 3080 aa5.7□□□□□ -1.5
MSH5-217ENST00000494458 ESPL1Q14674 2120 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 KALRNO60229 2985 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 TPRP12270 2363 aaKnown RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 IGKV1D-17A0A075B6S4 117 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 PLSCR5A0PG75 271 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 C9orf170A2RU37 121 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 NKX2-6A6NCS4 301 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 VSTM5A8MXK1 200 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 B9A039 149 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 SDCBPO00560 298 aaPredicted RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 WNT9BO14905 357 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 FABP7O15540 132 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 SNAPC5O75971 98 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 RGS11O94810 467 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 GIPP09681 153 aaPredicted RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 PSG2P11465 335 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 EGR1P18146 543 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 GLRA1P23415 457 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 GRNP28799 593 aaKnown RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 ERP29P30040 261 aaKnown RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 SERPINF1P36955 418 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 OR3A1P47881 315 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 RND3P61587 244 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 IL15RAQ13261 267 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 PPP1R1AQ13522 171 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 TESK1Q15569 626 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 C2orf68Q2NKX9 166 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 SMIM21Q3B7S5 101 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 SCGB2B2Q4G0G5 96 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 LY6G6FQ5SQ64 297 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 SLC22A25Q6T423 547 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 FIP1L1Q6UN15 594 aaKnown RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 C12orf45Q8N5I9 185 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms