RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SLC35E2BP0CK96 405 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 ZNF32P17041 273 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 NELFEP18615 380 aaKnown RBP3.67□□□□□ -1.82
SMC2-205ENST00000493955 AZU1P20160 251 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 SYT1P21579 422 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 GTF2H1P32780 548 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 TUFMP49411 452 aaKnown RBP3.67□□□□□ -1.82
SMC2-205ENST00000493955 XKP51811 444 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 TPBGQ13641 420 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 TRIP13Q15645 432 aaPredicted RBP3.67□□□□□ -1.82
SMC2-205ENST00000493955 FAM222AQ5U5X8 452 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 PDPK2PQ6A1A2 396 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 CLEC6AQ6EIG7 209 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 LRRC6Q86X45 466 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 TMEM25Q86YD3 366 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 LINC00337Q8N6G1 96 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 PDCD6IPQ8WUM4 868 aaKnown RBP3.67□□□□□ -1.82
SMC2-205ENST00000493955 C22orf15Q8WYQ4 148 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 TRNT1Q96Q11 434 aaKnown RBP3.67□□□□□ -1.82
SMC2-205ENST00000493955 MED10Q9BTT4 135 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 SDHAF3Q9NRP4 125 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 MS4A12Q9NXJ0 267 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 USH1CQ9Y6N9 552 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 GOLGB1Q14789 3259 aaKnown RBP3.66□□□□□ -1.82
SMC2-205ENST00000493955 ZNF831Q5JPB2 1677 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 ANKRD31Q8N7Z5 1873 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 CEP350Q5VT06 3117 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 OR2AT4A6NND4 320 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 A8MWL6 223 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 SGCEO43556 437 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 IGKV3-11P04433 115 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 TAC1P20366 129 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 RPA3P35244 121 aaPredicted RBP3.66□□□□□ -1.82
SMC2-205ENST00000493955 UGT2B10P36537 528 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 TTPAP49638 278 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 SYCP1Q15431 976 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 ZBTB6Q15916 424 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 KLHL12Q53G59 568 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 UNQ9165/PRO28630Q6UXU0 137 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 FAM231DQ6ZW35 169 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 PDPNQ86YL7 162 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 CYP4Z2PQ8N1L4 340 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 OR2AE1Q8NHA4 323 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 ZNF420Q8TAQ5 688 aaPredicted RBP3.66□□□□□ -1.82
SMC2-205ENST00000493955 BBS2Q9BXC9 721 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 API5Q9BZZ5 524 aaKnown RBP3.66□□□□□ -1.82
SMC2-205ENST00000493955 RAB22AQ9UL26 194 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 C10orf71Q711Q0 1435 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 KCPQ6ZWJ8 1503 aa3.66□□□□□ -1.82
SMC2-205ENST00000493955 ZNF233A6NK53 670 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 TRPC5OSA6NMA1 111 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 UPK2O00526 184 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 BRI3O95415 125 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 HTR2BP41595 481 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 MAGEA6P43360 314 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 ELF3P78545 371 aaPredicted RBP3.65□□□□□ -1.83
SMC2-205ENST00000493955 ATP6AP1LQ52LC2 224 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 KCTD16Q68DU8 428 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 MRPL52Q86TS9 123 aaKnown RBP3.65□□□□□ -1.83
SMC2-205ENST00000493955 BLNKQ8WV28 456 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 RTN4IP1Q8WWV3 396 aaPredicted RBP3.65□□□□□ -1.83
SMC2-205ENST00000493955 NELFBQ8WX92 580 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 RORBQ92753 470 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 GPR82Q96P67 336 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 USP42Q9H9J4 1324 aaKnown RBP3.65□□□□□ -1.83
SMC2-205ENST00000493955 RBM22Q9NW64 420 aaKnown RBP eCLIP3.65□□□□□ -1.83
SMC2-205ENST00000493955 NRXN2Q9P2S2 1712 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 SCN11AQ9UI33 1791 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 SNX24Q9Y343 169 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 INSIG2Q9Y5U4 225 aa3.65□□□□□ -1.83
SMC2-205ENST00000493955 DICER1Q9UPY3 1922 aaKnown RBP3.64□□□□□ -1.83
SMC2-205ENST00000493955 RTL1A6NKG5 1358 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 RBFOX3A6NFN3 312 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 BTNL10A8MVZ5 291 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 CETN3O15182 167 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 OR2A4O95047 310 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 TNFAIP8O95379 198 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 WISP3O95389 354 aaPredicted RBP3.64□□□□□ -1.83
SMC2-205ENST00000493955 IGKV1-39P01597 117 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 IGKV1D-39P04432 117 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 CDK1P06493 297 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 GP1BAP07359 652 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 SNRPAP09012 282 aaKnown RBP3.64□□□□□ -1.83
SMC2-205ENST00000493955 CD28P10747 220 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 LINC00315P59091 139 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 CD164Q04900 197 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 PMS2P3Q13401 168 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 BTN1A1Q13410 526 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 FLOT2Q14254 428 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 CEACAM21Q3KPI0 293 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 ZNF404Q494X3 552 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 MORN3Q6PF18 240 aaPredicted RBP3.64□□□□□ -1.83
SMC2-205ENST00000493955 PRNTQ86SH4 94 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 SLC35G3Q8N808 338 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 OR52N1Q8NH53 320 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 UBA3Q8TBC4 463 aa3.64□□□□□ -1.83
SMC2-205ENST00000493955 OR2A7Q96R45 310 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms