RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SLITRK2Q9H156 845 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 NCOR1P1Q9H4R4 102 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 PCDHB16Q9NRJ7 776 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 ST3GAL6Q9Y274 331 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 VGLL3A8MV65 326 aa18.34■□□□□ 0.53
SNIP1-203ENST00000493916 ATP6V1G2O95670 118 aa18.34■□□□□ 0.53
SNIP1-203ENST00000493916 CSTBP04080 98 aaKnown RBP18.34■□□□□ 0.53
SNIP1-203ENST00000493916 DHRS7BQ6IAN0 325 aaPredicted RBP18.34■□□□□ 0.53
SNIP1-203ENST00000493916 NKAIN3Q8N8D7 197 aa18.34■□□□□ 0.53
SNIP1-203ENST00000493916 MALSU1Q96EH3 234 aa18.34■□□□□ 0.53
SNIP1-203ENST00000493916 CLEC7AQ9BXN2 247 aa18.34■□□□□ 0.53
SNIP1-203ENST00000493916 PPIL3Q9H2H8 161 aaKnown RBP18.34■□□□□ 0.53
SNIP1-203ENST00000493916 OR6C3Q9NZP0 311 aa18.34■□□□□ 0.53
SNIP1-203ENST00000493916 CLPSL1A2RUU4 121 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 HSPB6O14558 160 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 RGS10O43665 173 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 MMP23AO75900 390 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 SERPINA2P20848 420 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 CRHBPP24387 322 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 GPR50Q13585 617 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 GPR176Q14439 515 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 MED22Q15528 200 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 MINOS1Q5TGZ0 78 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 PRAMEF5Q5TYX0 476 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 OLFML2AQ68BL7 652 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 OR52W1Q6IF63 320 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 LYPD6Q86Y78 171 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 JAGN1Q8N5M9 183 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 MINOS1-NBL1R4GNA1 71 aa18.33■□□□□ 0.52
SNIP1-203ENST00000493916 ZNF729A6NN14 1252 aaPredicted RBP18.32■□□□□ 0.52
SNIP1-203ENST00000493916 MAS1P04201 325 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 GTF2F2P13984 249 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 CDK2P24941 298 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 PAX6P26367 422 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 DYNC1I2Q13409 638 aaKnown RBP18.32■□□□□ 0.52
SNIP1-203ENST00000493916 MPV17LQ2QL34 196 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 LDLRAD2Q5SZI1 272 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 UNQ9370/PRO34162Q6UXP9 181 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 DYNAPQ8N1N2 210 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 SGMS2Q8NHU3 365 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 WFDC12Q8WWY7 111 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 MUL1Q969V5 352 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 BARHL1Q9BZE3 327 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 ING3Q9NXR8 418 aa18.32■□□□□ 0.52
SNIP1-203ENST00000493916 MRPS28Q9Y2Q9 187 aaKnown RBP18.32■□□□□ 0.52
SNIP1-203ENST00000493916 GEMIN2O14893 280 aaKnown RBP18.31■□□□□ 0.52
SNIP1-203ENST00000493916 OR7C1O76099 320 aaPredicted RBP18.31■□□□□ 0.52
SNIP1-203ENST00000493916 SLC22A6Q4U2R8 563 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 ACSM3Q53FZ2 586 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 RSBN1Q5VWQ0 802 aaPredicted RBP18.31■□□□□ 0.52
SNIP1-203ENST00000493916 LIAT1Q6ZQX7 453 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 Q6ZSV7 163 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 PRSS48Q7RTY5 328 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 RTN4RL2Q86UN3 420 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 SUMF2Q8NBJ7 301 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 LINC01006Q8NI28 216 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 PIFOQ8TCI5 191 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 UFD1Q92890 307 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 MRPS24Q96EL2 167 aaKnown RBP18.31■□□□□ 0.52
SNIP1-203ENST00000493916 UQCC2Q9BRT2 126 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 TMED9Q9BVK6 235 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 DPCDQ9BVM2 203 aaPredicted RBP18.31■□□□□ 0.52
SNIP1-203ENST00000493916 C16orf95Q9H693 158 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 ZNF581Q9P0T4 197 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 RAB26Q9ULW5 256 aa18.31■□□□□ 0.52
SNIP1-203ENST00000493916 MEGF11A6BM72 1044 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 SC5DO75845 299 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 TSPAN9O75954 239 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 CGB3P0DN86 165 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 CGB7P0DN87 165 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 CD34P28906 385 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 INSL4Q14641 139 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 C17orf58Q2M2W7 97 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 RBM48Q5RL73 367 aaKnown RBP18.3■□□□□ 0.52
SNIP1-203ENST00000493916 GLIPR1L1Q6UWM5 242 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 OR4D6Q8NGJ1 314 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 PLPPR1Q8TBJ4 325 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 PHYHIPQ92561 330 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 CNBD2Q96M20 576 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 LINC00574Q9H8X3 128 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 RAB18Q9NP72 206 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 ISYNA1Q9NPH2 558 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 KIF25Q9UIL4 384 aa18.3■□□□□ 0.52
SNIP1-203ENST00000493916 MEIKINA0A087WXM9 373 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 A0A087X0M5 115 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 KBTBD11-OT1A0A1B0GTJ5 212 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 A0A1B0GX30 115 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 A0A1W2PP11 408 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 GDNFP39905 211 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 GLP1RP43220 463 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 GP2P55259 537 aaKnown RBP18.29■□□□□ 0.52
SNIP1-203ENST00000493916 SSX2Q16385 188 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 AWAT2Q6E213 333 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 BAIAP2L2Q6UXY1 529 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 ABHD12Q8N2K0 398 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 ZNF565Q8N9K5 539 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 OR4P4Q8NGL7 312 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 OR13A1Q8NGR1 328 aa18.29■□□□□ 0.52
SNIP1-203ENST00000493916 VHLP40337 213 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 DYNLT3P51808 116 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms