RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 C4orf45Q96LM5 186 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 PRELID3AQ96N28 172 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 P2RX4Q99571 388 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 KCNE3Q9Y6H6 103 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 CRHP06850 196 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 PMELP40967 661 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 GFRA1P56159 465 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 ERVFRD-1P60508 538 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 ECSCRQ19T08 205 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 GAB4Q2WGN9 574 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 SLC23A3Q6PIS1 610 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 RNF133Q8WVZ7 376 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 HSPB9Q9BQS6 159 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 COL2A1P02458 1487 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-221ENST00000493795 AFDNP55196 1824 aaKnown RBP6.96□□□□□ -1.3
BRCA1-221ENST00000493795 NEURL4Q96JN8 1562 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 TRAV8-7A0A075B6U6 113 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 ANKRD20A5PA0PJZ0 165 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 A8MWL6 223 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 FOXC1Q12948 553 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 SLC25A34Q6PIV7 304 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 OR10S1Q8NGN2 331 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 ALKBH7Q9BT30 221 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-221ENST00000493795 FOXQ1Q9C009 403 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 ZBP1Q9H171 429 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 GHITMQ9H3K2 345 aa6.96□□□□□ -1.3
BRCA1-221ENST00000493795 BEX4Q9NWD9 120 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-221ENST00000493795 MEX3AA1L020 520 aaKnown RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 IGHV4-34P06331 123 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 FOXO1Q12778 655 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 NSUN5P2Q63ZY6 315 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 DEGS2Q6QHC5 323 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 C17orf99Q6UX52 265 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 NFAM1Q8NET5 270 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 ZCCHC14Q8WYQ9 949 aaKnown RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 DDB2Q92466 427 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 PARP11Q9NR21 331 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 IL19Q9UHD0 177 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 H0Y8X5 98 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 TMPRSS2O15393 492 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 IGHV3-13P01766 116 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 IGHV3-7P01780 117 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 HOXC4P09017 264 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF32P17041 273 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 PLPP2O43688 288 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 FGF9P31371 208 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 MFAP2P55001 183 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 EWSR1Q01844 656 aaKnown RBP eCLIP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF506Q5JVG8 444 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 PWWP2BQ6NUJ5 590 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF576Q9H609 170 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF275Q9NSD4 429 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 TBX21Q9UL17 535 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 A0A1W2PS18 150 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 PRKNO60260 465 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-221ENST00000493795 TM4SF20Q53R12 229 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 OR1L8Q8NGR8 309 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 TOX2Q96NM4 488 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 TSPAN32Q96QS1 320 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 RAB33BQ9H082 229 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 JKAMPQ9P055 326 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 INSIG2Q9Y5U4 225 aa6.95□□□□□ -1.3
BRCA1-221ENST00000493795 SLC25A17O43808 307 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 SMIM13P0DJ93 91 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GPR3P46089 330 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 DLX6P56179 175 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 BHLHA15Q7RTS1 189 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 FGF14Q92915 247 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 C16orf92Q96LL3 132 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 HARBI1Q96MB7 349 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 MMP25Q9NPA2 562 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 DNAJB12Q9NXW2 375 aaKnown RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 RCC2Q9P258 522 aaKnown RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 PREX1Q8TCU6 1659 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 IGLV3-10A0A075B6K4 115 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 HYPMO75409 117 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 ID4P47928 161 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 RPS20P60866 119 aaKnown RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 SKP2Q13309 424 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GUCA2BQ16661 112 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 C2orf83Q53S99 150 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF770Q6IQ21 691 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 RHBDD2Q6NTF9 364 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 CCDC144NLQ6NUI1 221 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 ZBTB34Q8NCN2 500 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 RAX2Q96IS3 184 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 SYT11Q9BT88 431 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 TRBV23-1A0A0A0MS06 115 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 A0A0B4J2E0 115 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 A0A1B0GU03 582 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 A0A1B0GX12 115 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 OR4C45A6NMZ5 311 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 LEUTXA8MZ59 168 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 WNT9BO14905 357 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 AMY1AP04745 511 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 TMIGD3P0DMS9 266 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 VDAC1P21796 283 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 PRDX2P32119 198 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms