RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 CHCHD3Q9NX63 227 aaKnown RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF581Q9P0T4 197 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 ING4Q9UNL4 249 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 FOXJ3Q9UPW0 622 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 EXOSC1Q9Y3B2 195 aaKnown RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 TBL2Q9Y4P3 447 aaKnown RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 PCDHGB5Q9Y5G0 923 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 VWFP04275 2813 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 TRGV10A0A0A0MS01 117 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 A0A1W2PPK0 400 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 IRGMA1A4Y4 181 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 ODAMA1E959 279 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 FUOMA2VDF0 154 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 TIMM23O14925 209 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 CD2P06729 351 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 CD24P25063 80 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 CAPGP40121 348 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 RSU1Q15404 277 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 AANATQ16613 207 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 PIGYQ3MUY2 71 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 PAN3Q58A45 887 aaKnown RBP8.59□□□□□ -1.03
COL6A3-214ENST00000493608 UTF1Q5T230 341 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 OGFRL1Q5TC84 451 aaPredicted RBP8.59□□□□□ -1.03
COL6A3-214ENST00000493608 DDI2Q5TDH0 399 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 ABHD12Q8N2K0 398 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 BPIFB6Q8NFQ5 453 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 RPS4Y2Q8TD47 263 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 HAVCR2Q8TDQ0 301 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 CORO2AQ92828 525 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 GHSRQ92847 366 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 CLEC7AQ9BXN2 247 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 RHOFQ9HBH0 211 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 FBLN5Q9UBX5 448 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF281Q9Y2X9 895 aa8.59□□□□□ -1.03
COL6A3-214ENST00000493608 TRAV39A0A0B4J263 110 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 TRAV24A0A0B4J272 114 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 A6NDX4 124 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 VGLL3A8MV65 326 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 M0QZ24 198 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 KCNAB3O43448 404 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 TSPAN15O95858 294 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 IGHV3-7P01780 117 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 VSIG10L2P0DP72 767 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 C21orf33P30042 268 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF93P35789 620 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 PTGFRP43088 359 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 KIR2DS4P43632 304 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 MTNR1BP49286 362 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 EFNB2P52799 333 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 C17orf58Q2M2W7 97 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 DMKNQ6E0U4 476 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 ELP2Q6IA86 826 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 AHSA2Q719I0 299 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 C8orf59Q8N0T1 100 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 KLHDC1Q8N7A1 406 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 CHST4Q8NCG5 386 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 PXT1Q8NFP0 134 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 OR4P4Q8NGL7 312 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 OR4C13Q8NGP0 309 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 FAM110DQ8TAY7 271 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 PLPPR1Q8TBJ4 325 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 FOXRED1Q96CU9 486 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 SMIM19Q96E16 107 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 GAL3ST2Q9H3Q3 398 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF286AQ9HBT8 521 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 RAB18Q9NP72 206 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 C8orf4Q9NR00 106 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 TAS2R3Q9NYW6 316 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 NKX1-2Q9UD57 310 aaPredicted RBP8.58□□□□□ -1.04
COL6A3-214ENST00000493608 KIF25Q9UIL4 384 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 TCF19Q9Y242 345 aa8.58□□□□□ -1.04
COL6A3-214ENST00000493608 TRAV8-7A0A075B6U6 113 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 MEIKINA0A087WXM9 373 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 A0A1W2PP11 408 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 MAGEA13PA6NCF6 341 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 F2RL2O00254 374 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 CASQ2O14958 399 aaPredicted RBP8.57□□□□□ -1.04
COL6A3-214ENST00000493608 ALDOBP05062 364 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 SERPINA2P20848 420 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 NFYBP25208 207 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 HTR1DP28221 377 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 BDKRB2P30411 391 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 GLP1RP43220 463 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 RPS11P62280 158 aaKnown RBP eCLIP8.57□□□□□ -1.04
COL6A3-214ENST00000493608 BLCAPP62952 87 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 PPP3R1P63098 170 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 MED21Q13503 144 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 RBM39Q14498 530 aaKnown RBP8.57□□□□□ -1.04
COL6A3-214ENST00000493608 LTC4SQ16873 150 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 FBLN7Q53RD9 439 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 MINOS1Q5TGZ0 78 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 OR52W1Q6IF63 320 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 HEPN1Q6WQI6 88 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 LYG1Q8N1E2 194 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 STX19Q8N4C7 294 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF485Q8NCK3 441 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 OR4D6Q8NGJ1 314 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 OR51T1Q8NGJ9 327 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 OR13A1Q8NGR1 328 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms