RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ZNF488Q96MN9 340 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CDCA4Q9BXL8 241 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CHST6Q9GZX3 395 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 MS4A5Q9H3V2 200 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 OPA3Q9H6K4 179 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GCM1Q9NP62 436 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FGF20Q9NP95 211 aaPredicted RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CA10Q9NS85 328 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CLCF1Q9UBD9 225 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 DKK4Q9UBT3 224 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 POLQO75417 2590 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 C20orf202A1L168 122 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 OR5H14A6NHG9 310 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LYNX1G3V0Z9 82 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 GABARAPH6UMI1 98 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CDK2AP1O14519 115 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ADAM20O43506 726 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SS18L1O75177 396 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 DHRS3O75911 302 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 HEXAP06865 529 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LYNX1P0DP58 116 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MGMTP16455 207 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 EPHA1P21709 976 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 THBS4P35443 961 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 AKR1C3P42330 323 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 GNG3P63215 75 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SCGB2A2Q13296 93 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ADIRFQ15847 76 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 IAH1Q2TAA2 248 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 EXOSC6Q5RKV6 272 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LRRTM1Q86UE6 522 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF573Q86YE8 665 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 C17orf78Q8N4C9 275 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LFNGQ8NES3 379 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 OR51A2Q8NGJ7 313 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 OR51S1Q8NGJ8 323 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SFT2D1Q8WV19 159 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 BCL2L2Q92843 193 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 NEUROG1Q92886 237 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 BORCS7Q96B45 105 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CMSS1Q9BQ75 279 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MOB1AQ9H8S9 216 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 TNFRSF19Q9NS68 423 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ELOVL5Q9NYP7 299 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 FRRS1LQ9P0K9 344 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 FLVCR2Q9UPI3 526 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 KIAA2026Q5HYC2 2103 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MEIKINA0A087WXM9 373 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 NKX6-3A6NJ46 265 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 H7BYZ3 331 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 M0QYG6 137 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 TMPRSS2O15393 492 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LY86O95711 162 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SERPINE2P07093 398 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 RRASP10301 218 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CTRB1P17538 263 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 HOXA1P49639 335 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 UBE2MP61081 183 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MICBQ29980 383 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 FAM209BQ5JX69 171 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CTRB2Q6GPI1 263 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 IGFL2Q6UWQ7 119 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 RBMS3Q6XE24 437 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM123Q8N131 208 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 RFESDQ8TAC1 157 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 KLF14Q8TD94 323 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ITLN1Q8WWA0 313 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 FAM3DQ96BQ1 224 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 WDR89Q96FK6 387 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SDSLQ96GA7 329 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ADGRG7Q96K78 797 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 GPX7Q96SL4 187 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SLX1AQ9BQ83 275 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SOX7Q9BT81 388 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 TAF9BQ9HBM6 251 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ISYNA1Q9NPH2 558 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 EHFQ9NZC4 300 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CRIM1Q9NZV1 1036 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 POLDIP2Q9Y2S7 368 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF106Q9H2Y7 1883 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ZFHX4Q86UP3 3567 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 A0A087X0M5 115 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 A0A1B0GX30 115 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 A0A1W2PPV4 95 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MBD3L4A6NDZ8 208 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MBD3L3A6NE82 208 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MBD3L5A6NJ08 208 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 GPR137BO60478 399 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LMX1BO60663 402 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 RAC2P15153 192 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LGALS4P56470 323 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 NANOS3P60323 173 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 H3F3AP84243 136 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ENDOGQ14249 297 aaKnown RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 PLA1AQ53H76 456 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 FAM201AQ5SY85 155 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LINC01590Q5TEZ4 76 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms