RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMED1Q13445 227 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 LRRC36Q1X8D7 754 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 KHDC1LQ5JSQ8 128 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 SPIN3Q5JUX0 258 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 SLC25A30Q5SVS4 291 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 MINOS1Q5TGZ0 78 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 HEPN1Q6WQI6 88 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 RTN4RL2Q86UN3 420 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 OR56B4Q8NH76 319 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 OR5AK2Q8NH90 309 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 MRAPQ8TCY5 172 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 CCDC107Q8WV48 283 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 TNFAIP8L1Q8WVP5 186 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 CAPSLQ8WWF8 208 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 SGCDQ92629 289 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 MYDGFQ969H8 173 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 SPSB1Q96BD6 273 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 RAB18Q9NP72 206 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 DPM3Q9P2X0 92 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 ENOPH1Q9UHY7 261 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 MINOS1-NBL1R4GNA1 71 aa7.08□□□□□ -1.28
HDAC3-211ENST00000491581 TRAV8-7A0A075B6U6 113 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 A0A1W2PPI3 338 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 WI2-2373I1.2A0A1W2PRP0 233 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ZNF736B4DX44 427 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 SLC31A2O15432 143 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 PEX14O75381 377 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ATP5HO75947 161 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 BAG2O95816 211 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 MPIG6BO95866 241 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 RPSAP08865 295 aaKnown RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 CCDC159P0C7I6 412 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ERP29P30040 261 aaKnown RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 DYNLT3P51808 116 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 CD83Q01151 205 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 BDH1Q02338 343 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 PAN3Q58A45 887 aaKnown RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 RSBN1Q5VWQ0 802 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 MEDAGQ5VYS4 303 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 C11orf87Q6NUJ2 197 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ETV3LQ6ZN32 361 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 LIAT1Q6ZQX7 453 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 CENPVQ7Z7K6 275 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 NDUFA11Q86Y39 141 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 Q8IYB0 196 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 PARP16Q8N5Y8 322 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 DRAM1Q8N682 238 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 OR51T1Q8NGJ9 327 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 TRUB1Q8WWH5 349 aaKnown RBP7.07□□□□□ -1.28
HDAC3-211ENST00000491581 CORO2AQ92828 525 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 STMN2Q93045 179 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ITFG2Q969R8 447 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 C10orf35Q96D05 121 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 S100A14Q9HCY8 104 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 CALYQ9NYX4 217 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ING4Q9UNL4 249 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 DHDHQ9UQ10 334 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 PSG11Q9UQ72 335 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 ORC6Q9Y5N6 252 aa7.07□□□□□ -1.28
HDAC3-211ENST00000491581 TCRBV4S1A1TA0A5B7 111 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 LEUTXA8MZ59 168 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 K7EIL1 84 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 TOR1AO14656 332 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 GEMIN2O14893 280 aaKnown RBP7.06□□□□□ -1.28
HDAC3-211ENST00000491581 PIN1P1O15428 100 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 MT-ND2P03891 347 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 SNRPBP14678 240 aaKnown RBP7.06□□□□□ -1.28
HDAC3-211ENST00000491581 SERPINA2P20848 420 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 CD34P28906 385 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 INSL4Q14641 139 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 LAIR2Q6ISS4 152 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 ZNF529Q6P280 563 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 KCTD20Q7Z5Y7 419 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 SERPINA12Q8IW75 414 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 PQLC1Q8N2U9 271 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 RBM14Q96PK6 669 aaKnown RBP7.06□□□□□ -1.28
HDAC3-211ENST00000491581 GPER1Q99527 375 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 GAL3ST2Q9H3Q3 398 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 KCNK15Q9H427 330 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 SEBOXQ9HB31 216 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-211ENST00000491581 INPP5EQ9NRR6 644 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 IDI2-AS1Q9NZ38 188 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 PITPNC1Q9UKF7 332 aa7.06□□□□□ -1.28
HDAC3-211ENST00000491581 KBTBD11-OT1A0A1B0GTJ5 212 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 ZNF729A6NN14 1252 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-211ENST00000491581 ANKRD65E5RJM6 399 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 J3QR06 171 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 OR2F2O95006 317 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 IGKV1D-33P01593 117 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 IGKV1-33P01594 117 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 CSN2P05814 226 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 GNAO1P09471 354 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 CD33P20138 364 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 GBX2P52951 348 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-211ENST00000491581 RPS11P62280 158 aaKnown RBP eCLIP7.05□□□□□ -1.28
HDAC3-211ENST00000491581 HES1Q14469 280 aa7.05□□□□□ -1.28
HDAC3-211ENST00000491581 RSU1Q15404 277 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms