RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 AK6Q9Y3D8 172 aaKnown RBP13.31□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 A0A0U1RQK1 487 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SLC22A1O15245 554 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 MYL9P24844 172 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 HTR2CP28335 458 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 NEDD8Q15843 81 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TAF9Q16594 264 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 ATAD3CQ5T2N8 411 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SYT6Q5T7P8 510 aaPredicted RBP13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PNKDQ8N490 385 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TMEM104Q8NE00 496 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 ZFAND2BQ8WV99 257 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 CORO2AQ92828 525 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM46BQ96A09 425 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 Q96M66 194 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 MDFIQ99750 246 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 BARHL1Q9BZE3 327 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 GAL3ST2Q9H3Q3 398 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PRDM13Q9H4Q3 707 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PLGRKTQ9HBL7 147 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SPACA1Q9HBV2 294 aa13.3□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 DSCAML1Q8TD84 2053 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A10PA6NDY2 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A18PA6NE21 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A16PA6NEW6 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 DNAJC9-AS1A6NH13 148 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A20PA6NIJ5 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A8PA6NJQ4 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A7PA6NKC0 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A22PA8MWA6 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A12PA8MX19 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A5PA8MXJ8 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A23PA8MXZ1 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SLC17A2O00624 439 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PDCD5O14737 125 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 CLPXO76031 633 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 MPIG6BO95866 241 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A15PP0C7V4 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A13PP0C7W8 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A14PP0C7W9 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM90A24PP0C7X0 464 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 IGHV1-8P0DP01 117 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 VSIG8P0DPA2 414 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 COX7A1P24310 79 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SAA4P35542 130 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 UBA52P62987 128 aaKnown RBP13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PAX5Q02548 391 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 RSBN1Q5VWQ0 802 aaPredicted RBP13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 C22orf42Q6IC83 251 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PLPPR1Q8TBJ4 325 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 NCOR1P1Q9H4R4 102 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 ZMAT3Q9HA38 289 aaKnown RBP13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TAS2R3Q9NYW6 316 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 OR6C3Q9NZP0 311 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 STUB1Q9UNE7 303 aa13.29□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 A0A087WXM4 84 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 MEIKINA0A087WXM9 373 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TRAV1-2A0A0B4J238 106 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 MEIOCA2RUB1 952 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 BPNT1O95861 308 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 GLP1RP43220 463 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 PSMD7P51665 324 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 RAB11BQ15907 218 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 MIDNQ504T8 468 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 Q6YL49 198 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TSPAN14Q8NG11 270 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 OR13D1Q8NGV5 346 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 NEK7Q8TDX7 302 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 TMEM59Q9BXS4 323 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 KCNK15Q9H427 330 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 ZNF696Q9H7X3 374 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 RCC2Q9P258 522 aaKnown RBP13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 KIF25Q9UIL4 384 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 FAM96BQ9Y3D0 163 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SESN1Q9Y6P5 492 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 V9GY05 133 aa13.28□□□□□ -0.28
MSH5-SAPCD1-206ENST00000491552 SHISA3A0PJX4 238 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ZNF729A6NN14 1252 aaPredicted RBP13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 HOXA3O43365 443 aaPredicted RBP13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FBP1P09467 338 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FGF9P31371 208 aaPredicted RBP13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RANBP1P43487 201 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 P2RY14Q15391 338 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 PRAMEF5Q5TYX0 476 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SLC35E4Q6ICL7 350 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR10K2Q6IF99 312 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 BRICD5Q6PL45 260 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LDLRAD3Q86YD5 345 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SLC25A28Q96A46 364 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 DUX5Q96PT3 197 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 C19orf24Q9BVV8 132 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 VCX3AQ9NNX9 186 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TXNL4BQ9NX01 149 aaKnown RBP13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SSR3Q9UNL2 185 aa13.27□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TMEM30CPA0ZSE6 113 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TMEM14DPA8MWL7 114 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms