RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SSR3Q9UNL2 185 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 V9GY05 133 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ODAMA1E959 279 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 CA11O75493 328 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 CRTAPO75718 401 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-212ENST00000489728 FAM189A2Q15884 450 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 RAB11BQ15907 218 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 MIDNQ504T8 468 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 KRBOX4Q5JUW0 171 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
CPSF7-212ENST00000489728 TCF23Q7RTU1 214 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 C11orf42Q8N5U0 333 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 SUMF2Q8NBJ7 301 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 LHX4Q969G2 390 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 SLC25A28Q96A46 364 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 COQ2Q96H96 371 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 GFI1Q99684 422 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 NKX3-1Q99801 234 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-212ENST00000489728 SLC6A7Q99884 636 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM59Q9BXS4 323 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 SIRT7Q9NRC8 400 aa9.08□□□□□ -0.96
CPSF7-212ENST00000489728 TXNL4BQ9NX01 149 aaKnown RBP9.08□□□□□ -0.96
CPSF7-212ENST00000489728 A0A1W2PP11 408 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 ZNF729A6NN14 1252 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM14DPA8MWL7 114 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 RNASEK-C17orf49H0YIS7 233 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 CLDN34H7C241 214 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM127O75204 238 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 CLPXO76031 633 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 VSIG8P0DPA2 414 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 ARSBP15848 533 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 CD36P16671 472 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 RAB3BP20337 219 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 FUT3P21217 361 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 RPS27AP62979 156 aaKnown RBP9.07□□□□□ -0.96
CPSF7-212ENST00000489728 QRFPP83859 136 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 AESQ08117 197 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 ATXN7L3Q14CW9 347 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-212ENST00000489728 TAF9Q16594 264 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 RSBN1Q5VWQ0 802 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-212ENST00000489728 C22orf42Q6IC83 251 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 SLC35E4Q6ICL7 350 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 OR52W1Q6IF63 320 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 ZNF565Q8N9K5 539 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 KCTD7Q96MP8 289 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 TM2D1Q9BX74 207 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 SELENOIQ9C0D9 397 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 LINC00574Q9H8X3 128 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 STEAP1Q9UHE8 339 aa9.07□□□□□ -0.96
CPSF7-212ENST00000489728 AK6Q9Y3D8 172 aaKnown RBP9.07□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM30CPA0ZSE6 113 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 IFITM5A6NNB3 132 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 MCRIP1C9JLW8 97 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 AIPO00170 330 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 NPFFO15130 113 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 PDCD6O75340 191 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 MPIG6BO95866 241 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 IGHV1-8P0DP01 117 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 CCL3L1P16619 93 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 GLIPR1P48060 266 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 RAB12Q6IQ22 244 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 HEPN1Q6WQI6 88 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 ZNF497Q6ZNH5 498 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 TRAPPC6BQ86SZ2 158 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 GAPTQ8N292 157 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 TMEM86BQ8N661 226 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 OR11H6Q8NGC7 330 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 OR10A7Q8NGE5 316 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 OR13D1Q8NGV5 346 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 PTX4Q96A99 478 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 FAM3DQ96BQ1 224 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 URM1Q9BTM9 101 aaKnown RBP9.06□□□□□ -0.96
CPSF7-212ENST00000489728 BANF2Q9H503 90 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 RAB9BQ9NP90 201 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 SESN1Q9Y6P5 492 aa9.06□□□□□ -0.96
CPSF7-212ENST00000489728 MEIKINA0A087WXM9 373 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 A0A087X0M5 115 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 KBTBD11-OT1A0A1B0GTJ5 212 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 A0A1B0GX30 115 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 NOTOA8MTQ0 251 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 HSPB6O14558 160 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 FBP1P09467 338 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 RAB6AP20340 208 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 GZMHP20718 246 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 SCAND1P57086 179 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 UNC119Q13432 240 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 ATAD3CQ5T2N8 411 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 HCP5Q6MZN7 132 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 BRD3OSQ6XYD6 125 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 ZNF554Q86TJ5 538 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 RTN4RL2Q86UN3 420 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 LDLRAD3Q86YD5 345 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 FAM89BQ8N5H3 189 aa9.05□□□□□ -0.96
CPSF7-212ENST00000489728 TPRX1Q8N7U7 411 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms